Sample ID: | Sample_02_237 |
Biosample type: | Cell line |
Tissue type: | Colon |
Biosample name: | V389 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE77737 |
Cancer type: | colorectal cancer |
CRC number: | 27165 |
TF number of all CRCs: | 62 |
TF list of all CRCs: | RREB1, HNF4A, ELF3, EHF, KLF5, HNF1A, SP1, IRF8, RUNX1, IRF1, MAFF, FOXA1, CDX2, HNF1B, MYB, KLF3, SREBF1, TCF7L2, IRF2, MEF2D, TGIF1, MAFK, NFE2L2, HOXB9, VDR, RXRA, BHLHE40, E2F2, FOSL2, JUND, ASCL2, RFX2, NR4A1, TEAD1, KLF4, FOXD2, KLF11, ATF1, ATF3, STAT6, JUNB, MYC, HES1, NR4A2, CEBPA, SREBF2, KLF16, FOS, ERF, ZBTB7B, SOX4, ETS2, GATA6, MECOM, JUN, SP3, ZNF217, CEBPB, ZBTB7A, MNT, NFIB, NFKB2 |
TF name | TF family | Frequency of TFs |
---|---|---|
ASCL2 | bHLH | 11688 / 27165 |
BHLHE40 | bHLH | 12556 / 27165 |
CDX2 | Homeobox | 16353 / 27165 |
E2F2 | E2F | 12272 / 27165 |
EHF | ETS | 27163 / 27165 |
ELF3 | ETS | 27163 / 27165 |
FOSL2 | TF_bZIP | 11937 / 27165 |
FOXA1 | Fork_head | 17337 / 27165 |
HNF1A | Homeobox | 26380 / 27165 |
HNF1B | Homeobox | 15485 / 27165 |
HNF4A | RXR-like | 27165 / 27165 |
HOXB9 | Homeobox | 12926 / 27165 |
IRF1 | IRF | 19234 / 27165 |
IRF8 | IRF | 23735 / 27165 |
KLF3 | zf-C2H2 | 14784 / 27165 |
KLF5 | zf-C2H2 | 26380 / 27165 |
MAFF | TF_bZIP | 18261 / 27165 |
MEF2D | SRF | 13462 / 27165 |
MYB | MYB | 15022 / 27165 |
NFE2L2 | TF_bZIP | 13209 / 27165 |
RREB1 | zf-C2H2 | 27165 / 27165 |
RUNX1 | Runt | 19453 / 27165 |
RXRA | RXR-like | 12700 / 27165 |
SP1 | zf-C2H2 | 23737 / 27165 |
SREBF1 | bHLH | 14325 / 27165 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
HNF4A | 27165 / 27165 | RXR-like | ENSG00000101076 |
RREB1 | 27165 / 27165 | zf-C2H2 | ENSG00000124782 |
EHF | 27163 / 27165 | ETS | ENSG00000135373 |
ELF3 | 27163 / 27165 | ETS | ENSG00000163435 |
HNF1A | 26380 / 27165 | Homeobox | ENSG00000135100 |
KLF5 | 26380 / 27165 | zf-C2H2 | ENSG00000102554 |
SP1 | 23737 / 27165 | zf-C2H2 | ENSG00000185591 |
IRF8 | 23735 / 27165 | IRF | ENSG00000140968 |
RUNX1 | 19453 / 27165 | Runt | ENSG00000159216 |
IRF1 | 19234 / 27165 | IRF | ENSG00000125347 |
MAFF | 18261 / 27165 | TF_bZIP | ENSG00000185022 |
FOXA1 | 17337 / 27165 | Fork_head | ENSG00000129514 |
CDX2 | 16353 / 27165 | Homeobox | ENSG00000165556 |
HNF1B | 15485 / 27165 | Homeobox | ENSG00000275410 |
MYB | 15022 / 27165 | MYB | ENSG00000118513 |
KLF3 | 14784 / 27165 | zf-C2H2 | ENSG00000109787 |
SREBF1 | 14325 / 27165 | bHLH | ENSG00000072310 |
TCF7L2 | 14063 / 27165 | HMG | ENSG00000148737 |
IRF2 | 13910 / 27165 | IRF | ENSG00000168310 |
MEF2D | 13462 / 27165 | SRF | ENSG00000116604 |
TGIF1 | 13334 / 27165 | Homeobox | ENSG00000177426 |
MAFK | 13283 / 27165 | TF_bZIP | ENSG00000198517 |
NFE2L2 | 13209 / 27165 | TF_bZIP | ENSG00000116044 |
HOXB9 | 12926 / 27165 | Homeobox | ENSG00000170689 |
VDR | 12772 / 27165 | THR-like | ENSG00000111424 |
RXRA | 12700 / 27165 | RXR-like | ENSG00000186350 |
BHLHE40 | 12556 / 27165 | bHLH | ENSG00000134107 |
E2F2 | 12272 / 27165 | E2F | ENSG00000007968 |
FOSL2 | 11937 / 27165 | TF_bZIP | ENSG00000075426 |
JUND | 11820 / 27165 | TF_bZIP | ENSG00000130522 |
ASCL2 | 11688 / 27165 | bHLH | ENSG00000183734 |
RFX2 | 11021 / 27165 | RFX | ENSG00000087903 |
NR4A1 | 10226 / 27165 | NGFIB-like | ENSG00000123358 |
TEAD1 | 9111 / 27165 | TEA | ENSG00000187079 |
KLF4 | 8902 / 27165 | zf-C2H2 | ENSG00000136826 |
FOXD2 | 8294 / 27165 | Fork_head | ENSG00000186564 |
KLF11 | 8261 / 27165 | zf-C2H2 | ENSG00000172059 |
ATF1 | 7931 / 27165 | TF_bZIP | ENSG00000123268 |
ATF3 | 7500 / 27165 | TF_bZIP | ENSG00000162772 |
STAT6 | 6402 / 27165 | STAT | ENSG00000166888 |
JUNB | 6205 / 27165 | TF_bZIP | ENSG00000171223 |
MYC | 6142 / 27165 | bHLH | ENSG00000136997 |
HES1 | 6052 / 27165 | bHLH | ENSG00000114315 |
NR4A2 | 6028 / 27165 | NGFIB-like | ENSG00000153234 |
CEBPA | 5742 / 27165 | TF_bZIP | ENSG00000245848 |
SREBF2 | 5222 / 27165 | bHLH | ENSG00000198911 |
KLF16 | 5122 / 27165 | zf-C2H2 | ENSG00000129911 |
FOS | 4516 / 27165 | TF_bZIP | ENSG00000170345 |
ERF | 4274 / 27165 | ETS | ENSG00000105722 |
ZBTB7B | 3904 / 27165 | ZBTB | ENSG00000160685 |
SOX4 | 3480 / 27165 | HMG | ENSG00000124766 |
ETS2 | 3428 / 27165 | ETS | ENSG00000157557 |
GATA6 | 3200 / 27165 | zf-GATA | ENSG00000141448 |
MECOM | 3044 / 27165 | zf-C2H2 | ENSG00000085276 |
JUN | 2533 / 27165 | TF_bZIP | ENSG00000177606 |
SP3 | 1514 / 27165 | zf-C2H2 | ENSG00000172845 |
ZNF217 | 1274 / 27165 | zf-C2H2 | ENSG00000171940 |
CEBPB | 1180 / 27165 | TF_bZIP | ENSG00000172216 |
ZBTB7A | 785 / 27165 | ZBTB | ENSG00000178951 |
MNT | 546 / 27165 | bHLH | ENSG00000070444 |
NFIB | 342 / 27165 | CTF/NFI | ENSG00000147862 |
NFKB2 | 2 / 27165 | RHD | ENSG00000077150 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
CDX2 | 65 | 99 | 164 |
JUN | 50 | 104 | 154 |
MAFK | 62 | 106 | 168 |
MAFF | 67 | 92 | 159 |
RREB1 | 67 | 107 | 174 |
ETS2 | 67 | 75 | 142 |
BHLHE40 | 66 | 94 | 160 |
NFE2L2 | 61 | 98 | 159 |
KLF4 | 55 | 107 | 162 |
MYC | 57 | 101 | 158 |
MYB | 63 | 105 | 168 |
SP1 | 65 | 107 | 172 |
EHF | 67 | 106 | 173 |
GATA6 | 64 | 84 | 148 |
RFX2 | 63 | 99 | 162 |
FOXA1 | 63 | 100 | 163 |
RUNX1 | 62 | 105 | 167 |
ZNF217 | 66 | 69 | 135 |
VDR | 62 | 107 | 169 |
TCF7L2 | 63 | 104 | 167 |
ZBTB7B | 64 | 94 | 158 |
MNT | 64 | 62 | 126 |
HOXB9 | 66 | 90 | 156 |
FOS | 59 | 95 | 154 |
IRF2 | 62 | 106 | 168 |
IRF1 | 64 | 107 | 171 |
IRF8 | 64 | 103 | 167 |
HNF4A | 67 | 107 | 174 |
MEF2D | 61 | 92 | 153 |
HES1 | 64 | 82 | 146 |
STAT6 | 59 | 102 | 161 |
MECOM | 58 | 89 | 147 |
FOSL2 | 67 | 92 | 159 |
NFKB2 | 27 | 78 | 105 |
JUNB | 63 | 94 | 157 |
ASCL2 | 59 | 106 | 165 |
FOXD2 | 61 | 98 | 159 |
RXRA | 60 | 106 | 166 |
SREBF2 | 58 | 102 | 160 |
SREBF1 | 67 | 101 | 168 |
JUND | 59 | 106 | 165 |
ERF | 64 | 80 | 144 |
ELF3 | 67 | 106 | 173 |
TEAD1 | 60 | 101 | 161 |
SOX4 | 50 | 105 | 155 |
CEBPB | 56 | 83 | 139 |
KLF11 | 58 | 103 | 161 |
KLF16 | 59 | 103 | 162 |
HNF1B | 65 | 94 | 159 |
KLF5 | 66 | 106 | 172 |
HNF1A | 66 | 105 | 171 |
KLF3 | 66 | 94 | 160 |
SP3 | 47 | 105 | 152 |
ZBTB7A | 66 | 70 | 136 |
NR4A2 | 57 | 102 | 159 |
NR4A1 | 65 | 99 | 164 |
CEBPA | 66 | 82 | 148 |
NFIB | 62 | 81 | 143 |
E2F2 | 66 | 89 | 155 |
ATF3 | 62 | 95 | 157 |
ATF1 | 62 | 90 | 152 |
TGIF1 | 63 | 100 | 163 |