TF information

TF name: STAT6
TF family: STAT
Ensembl gene ID: ENSG00000166888
Ensembl protein ID: ENSP00000438451, ENSP00000401486, ENSP00000444530, ENSP00000445409, ENSP00000451742, ENSP00000491116, ENSP00000451546, ENSP00000450921, ENSP00000300134
Entrez gene ID: 6778
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of STAT6 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_164Cell lineLungH2087_Parental0.55
Sample_02_228Cell lineOesophagusKYSE5100.40074557315937
Sample_02_237Cell lineColonV3890.23567090005522
Sample_02_242Cell lineColonV4810.021726591040185
Sample_02_304Cell lineNeuroblastomaN2060.40217391304348
Sample_02_313Cell lineNeuroblastomaSK-N-DZ0.41312741312741
Sample_02_395Cell lineMammary GlandBT-5490.098181818181818

STAT6 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name
Sample_02_164LungCell lineH2087_Parental
Sample_02_304NeuroblastomaCell lineN206
Sample_02_313NeuroblastomaCell lineSK-N-DZ

STAT6 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with STAT6
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Mutation of STAT6
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of STAT6

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr125749894657498946GTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
rs757010323chr125749930257499302CTexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125749311857493118GAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125749284557492845CAexonicSTAT6nonsynonymous ESCA|1|185|0.00541
rs757430778chr125750151357501513CTexonicSTAT6nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189,UCEC|1|248|0.00403
-chr125749662857496628TCexonicSTAT6nonsynonymous OV|1|469|0.00213
-chr125749900157499001TAexonicSTAT6nonsynonymous CHOL|1|35|0.02857
-chr125749909257499092CAexonicSTAT6nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
rs776930978chr125749618657496186GAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
rs766446465chr125749379857493798GAexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125749831457498314TCexonicSTAT6nonsynonymous LIHC|1|373|0.00268
-chr125750101957501037CCATAACAGCTTTTTTCTC-exonicSTAT6frameshift OV|1|469|0.00213
rs201779891chr125749365657493656GAexonicSTAT6synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr125749280757492807GAexonicSTAT6nonsynonymous PAAD|1|185|0.00541
-chr125750140057501400GAexonicSTAT6synonymous LUAD|1|543|0.00184
-chr125749264257492642CTexonicSTAT6nonsynonymous PAAD|1|185|0.00541
-chr125750050357500503GTexonicSTAT6nonsynonymous KIPAN|2|799|0.00250,KIRC|2|451|0.00443
-chr125749667757496677CGexonicSTAT6nonsynonymous OV|1|469|0.00213
-chr125749623557496236CT-exonicSTAT6frameshift BLCA|1|396|0.00253
-chr125749036357490363TAexonicSTAT6nonsynonymous THCA|1|504|0.00198
-chr125749285957492859CTexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125750001157500011CTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
-chr125749936657499366CTexonicSTAT6nonsynonymous BLCA|1|396|0.00253
rs766506451chr125749365557493655CTexonicSTAT6nonsynonymous LIHC|1|373|0.00268
-chr125749358257493582AGexonicSTAT6nonsynonymous ACC|1|90|0.01111
-chr125749359857493598ATexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125750106357501063GTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
-chr125749853957498539CGexonicSTAT6synonymous LIHC|1|373|0.00268
-chr125750035857500358GCexonicSTAT6nonsynonymous HNSC|1|512|0.00195
-chr125750035857500358GAexonicSTAT6synonymous BRCA|1|982|0.00102
rs778871413chr125750147057501470GAexonicSTAT6nonsynonymous BRCA|1|982|0.00102
-chr125749310657493106TCexonicSTAT6nonsynonymous STAD|2|395|0.00506,STES|2|395|0.00506
-chr125749910657499106TGexonicSTAT6nonsynonymous THYM|1|123|0.00813
-chr125749319257493192GTexonicSTAT6nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
rs575257117chr125750148257501482CTexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125749909457499094G-exonicSTAT6frameshift COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|3|395|0.00759,STES|3|395|0.00759
rs749244007chr125749315557493155GAexonicSTAT6stopgain CESC|1|194|0.00515,STAD|2|395|0.00506,STES|2|395|0.00506
-chr125749316957493169CAexonicSTAT6nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr125750033457500334CTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
rs754583855chr125749902557499025CTexonicSTAT6nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr125750103857501038TAexonicSTAT6synonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs749654830chr125749045457490454-CexonicSTAT6frameshift STAD|1|395|0.00253,STES|1|395|0.00253
-chr125749908357499083CTexonicSTAT6synonymous BRCA|1|982|0.00102
-chr125749665457496654ATexonicSTAT6nonsynonymous DLBC|1|48|0.02083
-chr125749902557499025C-exonicSTAT6frameshift LIHC|1|373|0.00268
-chr125749385857493858GAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125749363857493638GAexonicSTAT6synonymous BRCA|1|982|0.00102
-chr125749282557492825GAexonicSTAT6nonsynonymous DLBC|1|48|0.02083
-chr125749068057490680TAexonicSTAT6nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
rs773945763chr125749038657490386TGexonicSTAT6nonsynonymous UCEC|1|248|0.00403
rs776641789chr125750055257500552CAexonicSTAT6nonsynonymous STAD|2|395|0.00506,STES|2|395|0.00506
rs777634893chr125749905457499054CTexonicSTAT6nonsynonymous PRAD|2|499|0.00401
-chr125749047757490477CTexonicSTAT6nonsynonymous CESC|1|194|0.00515
-chr125749381857493818TCexonicSTAT6nonsynonymous DLBC|1|48|0.02083
-chr125749232657492326GAexonicSTAT6synonymous SKCM|1|368|0.00272
-chr125749610357496103GAexonicSTAT6synonymous SKCM|2|368|0.00543
-chr125749383557493835CAexonicSTAT6nonsynonymous PRAD|1|499|0.00200
-chr125750031857500318GAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125750049857500498CGexonicSTAT6nonsynonymous HNSC|1|512|0.00195
-chr125749856957498569GTexonicSTAT6nonsynonymous CHOL|1|35|0.02857
-chr125749663157496631TCexonicSTAT6nonsynonymous PRAD|1|499|0.00200
rs751205671chr125749309157493091CTexonicSTAT6nonsynonymous PAAD|1|185|0.00541
-chr125749381557493815AGexonicSTAT6nonsynonymous TGCT|1|155|0.00645
-chr125749263257492632TCexonicSTAT6nonsynonymous LUSC|1|178|0.00562
-chr125749053157490531TAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125749045557490455C-exonicSTAT6frameshift COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs749019797chr125749610957496109GAexonicSTAT6synonymous BRCA|1|982|0.00102
-chr125750200257502002GCexonicSTAT6synonymous SKCM|1|368|0.00272
-chr125749661557496615CGexonicSTAT6nonsynonymous HNSC|1|512|0.00195
rs759277693chr125749902057499020-GexonicSTAT6frameshift KIPAN|2|799|0.00250,KIRC|2|451|0.00443
rs780257871chr125750150757501507CTexonicSTAT6nonsynonymous OV|1|469|0.00213
-chr125749895357498953GAexonicSTAT6stopgain BRCA|1|982|0.00102
-chr125750199257501992GAexonicSTAT6stopgain SKCM|1|368|0.00272
-chr125749233957492339TAexonicSTAT6nonsynonymous ESCA|1|185|0.00541
-chr125749608257496082CAexonicSTAT6nonsynonymous LUAD|1|543|0.00184
-chr125749040857490408GAexonicSTAT6stopgain UCEC|1|248|0.00403
-chr125749089557490895G-exonicSTAT6frameshift ESCA|1|185|0.00541
-chr125749829357498293GTexonicSTAT6nonsynonymous BRCA|1|982|0.00102
rs768675729chr125749933257499332GAexonicSTAT6nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs750313035chr125749930357499303GAexonicSTAT6nonsynonymous PAAD|1|185|0.00541
rs767265892chr125750144357501443GAexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125749906357499063GAexonicSTAT6nonsynonymous PAAD|1|185|0.00541
-chr125749834257498342GCexonicSTAT6nonsynonymous LUAD|1|543|0.00184
-chr125750148957501489ACexonicSTAT6nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr125749906857499068GAexonicSTAT6synonymous SKCM|1|368|0.00272
-chr125749906757499067GAexonicSTAT6stopgain SKCM|1|368|0.00272
rs12314983chr125749230857492308GAexonicSTAT6synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs772021515chr125750199357501993GAexonicSTAT6synonymous LUAD|1|543|0.00184
-chr125749322057493220GAexonicSTAT6nonsynonymous SKCM|1|368|0.00272
-chr125750197757501977GAexonicSTAT6nonsynonymous BRCA|1|982|0.00102
-chr125750204157502041GAexonicSTAT6synonymous OV|1|469|0.00213
-chr125749310457493104CAexonicSTAT6nonsynonymous BRCA|1|982|0.00102
-chr125749665857496658TCexonicSTAT6nonsynonymous DLBC|1|48|0.02083
rs559027154chr125749929557499295CTexonicSTAT6synonymous PAAD|1|185|0.00541,STAD|1|395|0.00253,STES|1|395|0.00253
rs866152566chr125749234857492348AGexonicSTAT6nonsynonymous HNSC|2|512|0.00391,SKCM|1|368|0.00272
-chr125749067257490672CTexonicSTAT6nonsynonymous GBM|1|290|0.00345,GBMLGG|1|820|0.00122,HNSC|2|512|0.00391
-chr125749830657498306CTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
-chr125750105657501056GCexonicSTAT6nonsynonymous BLCA|1|396|0.00253
-chr125750057557500575CAexonicSTAT6stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr125749085257490852GAexonicSTAT6stopgain BLCA|1|396|0.00253
-chr125749263557492635GCexonicSTAT6nonsynonymous CESC|1|194|0.00515
-chr125749232857492328AGexonicSTAT6nonsynonymous UCEC|1|248|0.00403
-chr125750147857501478GAexonicSTAT6synonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs767674545chr125749909357499093-GexonicSTAT6frameshift BRCA|2|982|0.00204,KIPAN|6|799|0.00751,KIRC|6|451|0.01330,LUAD|1|543|0.00184,STAD|1|395|0.00253,STES|1|395|0.00253
rs762223545chr125749926457499264TCexonicSTAT6nonsynonymous LIHC|1|373|0.00268
-chr125749853557498535AGexonicSTAT6nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
rs188884452chr125750201257502012CTexonicSTAT6nonsynonymous UCEC|1|248|0.00403
-chr125749932657499326CTexonicSTAT6nonsynonymous BRCA|2|982|0.00204
-chr125749929357499293ATexonicSTAT6nonsynonymous LIHC|1|373|0.00268
-chr125750109657501096CTexonicSTAT6nonsynonymous BRCA|1|982|0.00102
-chr125749044557490445CGexonicSTAT6nonsynonymous LUSC|1|178|0.00562
-chr125749284857492848ACexonicSTAT6synonymous BRCA|1|982|0.00102

Disease information of STAT6
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
STAT6 Dermatitis, Atopic C16;C17;C20 Disease or Syndrome CTD_human
STAT6 Edema C23 Sign or Symptom CTD_human
STAT6 Head and Neck Neoplasms C04 Neoplastic Process CTD_human
STAT6 Head Neoplasms C04 Neoplastic Process CTD_human
STAT6 hemangiopericytoma C04 Neoplastic Process ORPHANET
STAT6 Neck Neoplasms C04 Neoplastic Process CTD_human
STAT6 Pulmonary Fibrosis C08 Disease or Syndrome CTD_human
STAT6 Diffuse Large B-Cell Lymphoma C04;C15;C20 Neoplastic Process CGI
STAT6 Hamman-Rich syndrome C08 Disease or Syndrome CTD_human
STAT6 Eczema, Infantile C16;C17;C20 Disease or Syndrome CTD_human
STAT6 Anasarca C23 Pathologic Function CTD_human
STAT6 Malignant Head and Neck Neoplasm C04 Neoplastic Process CTD_human
STAT6 Cancer of Neck C04 Neoplastic Process CTD_human
STAT6 Cancer of Head C04 Neoplastic Process CTD_human
STAT6 Upper Aerodigestive Tract Neoplasms C04 Neoplastic Process CTD_human
STAT6 Solitary fibrous tumor C04 Neoplastic Process CTD_human;ORPHANET

Pathway associated with STAT6
pathway_ID pathway_name pathway_source gene_number edge_number
pathway0000633 Downstream signal transduction reactome 29 307
pathway0000899 Gene expression of SOCS by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) inoh 14 66
pathway0000900 Gene expression of SOCS1 by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) inoh 8 29
pathway0000901 Gene expression of SOCS3 by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) inoh 8 29
pathway0001104 IL-13 signaling pathway(JAK1 TYK2 STAT6) ( IL-13 signaling(JAK1 TYK2 STAT6) ) inoh 10 45
pathway0001108 IL-4 signaling pathway(JAK1 JAK3 STAT6) ( IL-4 signaling(JAK1 JAK3 STAT6) ) inoh 7 23
pathway0001135 IL9 netpath 24 200
pathway0001228 JAK/STAT signaling pathway panther 15 87
pathway0002040 Signaling events mediated by TCPTP pid 40 361
pathway0002355 TSLP netpath 24 159
pathway0002686 Hs_Tryptophan_metabolism_WP465_85055 wikipathways 45 103
pathway0002689 Hs_Cytokines_and_Inflammatory_Response_WP530_79331 wikipathways 21 53
pathway0002758 Hs_TGF-beta_Receptor_Signaling_WP560_90187 wikipathways 28 32
pathway0002840 Hs_G1_to_S_cell_cycle_control_WP45_80001 wikipathways 8 21
pathway0002864 Hs_IL-4_Signaling_Pathway_WP395_89828 wikipathways 41 397

Go term information of STAT6
GO_term_name GO_term_type TF_name
GO_REGULATION_OF_DNA_RECOMBINATION BP STAT6
GO_MAMMARY_GLAND_MORPHOGENESIS BP STAT6
GO_POSITIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE BP STAT6
GO_GLAND_MORPHOGENESIS BP STAT6
GO_POSITIVE_REGULATION_OF_TYPE_I_INTERFERON_PRODUCTION BP STAT6
GO_RESPONSE_TO_INTERLEUKIN_4 BP STAT6
GO_ALPHA_BETA_T_CELL_DIFFERENTIATION BP STAT6
GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT BP STAT6
GO_REGULATION_OF_TYPE_2_IMMUNE_RESPONSE BP STAT6
GO_POSITIVE_REGULATION_OF_B_CELL_MEDIATED_IMMUNITY BP STAT6
GO_LEUKOCYTE_DIFFERENTIATION BP STAT6
GO_CELLULAR_RESPONSE_TO_INTERLEUKIN_4 BP STAT6
GO_NEGATIVE_REGULATION_OF_TYPE_2_IMMUNE_RESPONSE BP STAT6
GO_REGULATION_OF_IMMUNOGLOBULIN_PRODUCTION BP STAT6
GO_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION BP STAT6
GO_T_HELPER_1_TYPE_IMMUNE_RESPONSE BP STAT6
GO_T_CELL_DIFFERENTIATION_INVOLVED_IN_IMMUNE_RESPONSE BP STAT6
GO_CELLULAR_RESPONSE_TO_HYDROGEN_PEROXIDE BP STAT6
GO_POSITIVE_REGULATION_OF_LYMPHOCYTE_MEDIATED_IMMUNITY BP STAT6
GO_ORGAN_MORPHOGENESIS BP STAT6
GO_POSITIVE_T_CELL_SELECTION BP STAT6
GO_REGULATION_OF_B_CELL_MEDIATED_IMMUNITY BP STAT6
GO_REGULATION_OF_LYMPHOCYTE_MEDIATED_IMMUNITY BP STAT6
GO_POSITIVE_REGULATION_OF_IMMUNOGLOBULIN_PRODUCTION BP STAT6
GO_ADAPTIVE_IMMUNE_RESPONSE BP STAT6
GO_CD4_POSITIVE_OR_CD8_POSITIVE_ALPHA_BETA_T_CELL_LINEAGE_COMMITMENT BP STAT6
GO_REGULATION_OF_ISOTYPE_SWITCHING BP STAT6
GO_ALPHA_BETA_T_CELL_ACTIVATION BP STAT6
GO_POSITIVE_REGULATION_OF_PRODUCTION_OF_MOLECULAR_MEDIATOR_OF_IMMUNE_RESPONSE BP STAT6
GO_T_CELL_LINEAGE_COMMITMENT BP STAT6
GO_POSITIVE_REGULATION_OF_DNA_RECOMBINATION BP STAT6
GO_EPITHELIAL_CELL_PROLIFERATION BP STAT6
GO_MAMMARY_GLAND_EPITHELIAL_CELL_PROLIFERATION BP STAT6
GO_CELLULAR_RESPONSE_TO_REACTIVE_NITROGEN_SPECIES BP STAT6
GO_POSITIVE_REGULATION_OF_B_CELL_ACTIVATION BP STAT6
GO_CELLULAR_RESPONSE_TO_REACTIVE_OXYGEN_SPECIES BP STAT6
GO_RESPONSE_TO_HYDROGEN_PEROXIDE BP STAT6
GO_T_CELL_SELECTION BP STAT6
GO_REGULATION_OF_PRODUCTION_OF_MOLECULAR_MEDIATOR_OF_IMMUNE_RESPONSE BP STAT6
GO_MEMBRANE_MICRODOMAIN CC STAT6
GO_CORE_PROMOTER_BINDING MF STAT6
GO_NUCLEIC_ACID_BINDING_TRANSCRIPTION_FACTOR_ACTIVITY MF STAT6
GO_RNA_POLYMERASE_II_CORE_PROMOTER_SEQUENCE_SPECIFIC_DNA_BINDING MF STAT6
GO_CORE_PROMOTER_SEQUENCE_SPECIFIC_DNA_BINDING MF STAT6

Survival analysis of STAT6



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of STAT6