Sample ID: | Sample_02_313 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | SK-N-DZ |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 259 |
TF number of all CRCs: | 34 |
TF list of all CRCs: | RARA, FOXO3, TBX20, GATA3, JUND, KLF13, TBX2, MEIS1, PHOX2B, STAT6, KLF7, MEF2D, PHOX2A, GATA2, JUNB, ZBTB7B, TLX2, MEIS2, MAZ, TFAP4, TEAD1, SOX4, GLI2, MAFB, ISL1, SOX12, LBX2, CREB1, NFE2L2, SATB1, ZNF217, MNT, SIX3, NFIB |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
RARA | 258 / 259 | THR-like | ENSG00000131759 |
FOXO3 | 258 / 259 | Fork_head | ENSG00000118689 |
TBX20 | 241 / 259 | T-box | ENSG00000164532 |
GATA3 | 199 / 259 | zf-GATA | ENSG00000107485 |
JUND | 175 / 259 | TF_bZIP | ENSG00000130522 |
KLF13 | 133 / 259 | zf-C2H2 | ENSG00000169926 |
MEIS1 | 125 / 259 | Homeobox | ENSG00000143995 |
TBX2 | 125 / 259 | T-box | ENSG00000121068 |
PHOX2B | 117 / 259 | Homeobox | ENSG00000109132 |
STAT6 | 107 / 259 | STAT | ENSG00000166888 |
KLF7 | 100 / 259 | zf-C2H2 | ENSG00000118263 |
MEF2D | 100 / 259 | SRF | ENSG00000116604 |
PHOX2A | 79 / 259 | Homeobox | ENSG00000165462 |
GATA2 | 68 / 259 | zf-GATA | ENSG00000179348 |
JUNB | 68 / 259 | TF_bZIP | ENSG00000171223 |
ZBTB7B | 65 / 259 | ZBTB | ENSG00000160685 |
MEIS2 | 61 / 259 | Homeobox | ENSG00000134138 |
TLX2 | 61 / 259 | Homeobox | ENSG00000115297 |
MAZ | 60 / 259 | zf-C2H2 | ENSG00000103495 |
TFAP4 | 56 / 259 | bHLH | ENSG00000090447 |
TEAD1 | 50 / 259 | TEA | ENSG00000187079 |
SOX4 | 41 / 259 | HMG | ENSG00000124766 |
MAFB | 39 / 259 | TF_bZIP | ENSG00000204103 |
GLI2 | 39 / 259 | zf-C2H2 | ENSG00000074047 |
ISL1 | 38 / 259 | Homeobox | ENSG00000016082 |
SOX12 | 36 / 259 | HMG | ENSG00000177732 |
LBX2 | 32 / 259 | Homeobox | ENSG00000179528 |
NFE2L2 | 26 / 259 | TF_bZIP | ENSG00000116044 |
CREB1 | 26 / 259 | TF_bZIP | ENSG00000118260 |
SATB1 | 25 / 259 | CUT | ENSG00000182568 |
ZNF217 | 22 / 259 | zf-C2H2 | ENSG00000171940 |
MNT | 18 / 259 | bHLH | ENSG00000070444 |
SIX3 | 6 / 259 | Homeobox | ENSG00000138083 |
NFIB | 1 / 259 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ZNF217 | 32 | 31 | 63 |
ISL1 | 36 | 43 | 79 |
JUND | 33 | 55 | 88 |
TBX2 | 35 | 51 | 86 |
TEAD1 | 33 | 50 | 83 |
MAFB | 24 | 59 | 83 |
SOX4 | 21 | 58 | 79 |
KLF13 | 37 | 49 | 86 |
STAT6 | 35 | 55 | 90 |
GLI2 | 29 | 46 | 75 |
NFE2L2 | 17 | 54 | 71 |
MNT | 35 | 29 | 64 |
MEIS2 | 30 | 51 | 81 |
MEIS1 | 33 | 56 | 89 |
SIX3 | 26 | 36 | 62 |
KLF7 | 34 | 49 | 83 |
TBX20 | 35 | 58 | 93 |
RARA | 37 | 59 | 96 |
JUNB | 37 | 46 | 83 |
ZBTB7B | 31 | 45 | 76 |
LBX2 | 28 | 49 | 77 |
MEF2D | 34 | 50 | 84 |
CREB1 | 30 | 41 | 71 |
SATB1 | 29 | 50 | 79 |
PHOX2A | 34 | 51 | 85 |
PHOX2B | 36 | 51 | 87 |
GATA2 | 36 | 44 | 80 |
GATA3 | 37 | 56 | 93 |
FOXO3 | 36 | 58 | 94 |
NFIB | 6 | 35 | 41 |
TFAP4 | 28 | 57 | 85 |
MAZ | 28 | 56 | 84 |
TLX2 | 28 | 56 | 84 |
SOX12 | 27 | 55 | 82 |