Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_01_001 | Cell line | Prostate | 22Rv1 | 0.53995157384988 |
Sample_02_021 | Cell line | Colon | V429 | 0.012107235514558 |
Sample_02_078 | Primary cell | Neuroblastoma | low-MYCN-Neuroblastoma-patient-cells | 0.25 |
Sample_02_168 | Cell line | Prostate | LNCaP | 0.57034220532319 |
Sample_02_227 | Cell line | Oesophagus | TE7 | 0.48 |
Sample_02_241 | Cell line | Colon | V456 | 0.076749435665914 |
Sample_02_242 | Cell line | Colon | V481 | 0.68858552842402 |
Sample_02_296 | Cell line | Neuroblastoma | CLB-BER-Lud | 0.48355011476664 |
Sample_02_298 | Cell line | Neuroblastoma | CLB-GA | 0.3972602739726 |
Sample_02_299 | Cell line | Neuroblastoma | CLB-MA | 0.1462829736211 |
Sample_02_300 | Cell line | Neuroblastoma | CLB-PE | 0.51282051282051 |
Sample_02_303 | Cell line | Neuroblastoma | LAN1 | 0.51428571428571 |
Sample_02_304 | Cell line | Neuroblastoma | N206 | 0.4320652173913 |
Sample_02_307 | Cell line | Neuroblastoma | SJNB12 | 0.57746478873239 |
Sample_02_308 | Cell line | Neuroblastoma | SJNB1 | 0.546875 |
Sample_02_309 | Cell line | Neuroblastoma | SJNB6 | 0.53554502369668 |
Sample_02_312 | Cell line | Neuroblastoma | SK-N-BE_2-C | 0.60106382978723 |
Sample_02_313 | Cell line | Neuroblastoma | SK-N-DZ | 0.51351351351351 |
Sample_02_314 | Cell line | Neuroblastoma | SK-N-FI | 0.49382716049383 |
Sample_02_319 | Cell line | Neuroblastoma | NB-EBc1 | 0.17341040462428 |
Sample_02_424 | Cell line | Colon | SW620 | 0.71014492753623 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_01_001 | Prostate | Cell line | 22Rv1 |
Sample_02_242 | Colon | Cell line | V481 |
Sample_02_296 | Neuroblastoma | Cell line | CLB-BER-Lud |
Sample_02_298 | Neuroblastoma | Cell line | CLB-GA |
Sample_02_300 | Neuroblastoma | Cell line | CLB-PE |
Sample_02_304 | Neuroblastoma | Cell line | N206 |
Sample_02_307 | Neuroblastoma | Cell line | SJNB12 |
Sample_02_308 | Neuroblastoma | Cell line | SJNB1 |
Sample_02_309 | Neuroblastoma | Cell line | SJNB6 |
Sample_02_312 | Neuroblastoma | Cell line | SK-N-BE_2-C |
Sample_02_424 | Colon | Cell line | SW620 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr15 | 31669829 | 31669829 | - | T | UTR3 | KLF13 | unknown | ESCA|1|185|0.00541 |
- | chr15 | 31664339 | 31664339 | G | A | exonic | KLF13 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr15 | 31664347 | 31664347 | C | T | exonic | KLF13 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr15 | 31619856 | 31619856 | C | G | exonic | KLF13 | synonymous | BLCA|1|396|0.00253 |
- | chr15 | 31664225 | 31664225 | T | C | exonic | KLF13 | nonsynonymous | KIPAN|4|799|0.00501,KIRC|4|451|0.00887 |
- | chr15 | 31664287 | 31664287 | T | C | exonic | KLF13 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr15 | 31664260 | 31664260 | G | - | exonic | KLF13 | frameshift | LUAD|1|543|0.00184 |
- | chr15 | 31664246 | 31664246 | G | A | exonic | KLF13 | nonsynonymous | PRAD|1|499|0.00200 |
- | chr15 | 31664305 | 31664305 | G | A | exonic | KLF13 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr15 | 31664399 | 31664399 | G | A | exonic | KLF13 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr15 | 31664281 | 31664281 | C | T | exonic | KLF13 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr15 | 31664456 | 31664456 | G | A | exonic | KLF13 | nonsynonymous | SARC|1|247|0.00405 |
- | chr15 | 31664331 | 31664331 | C | T | exonic | KLF13 | synonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr15 | 31664264 | 31664264 | G | T | exonic | KLF13 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr15 | 31664372 | 31664372 | C | T | exonic | KLF13 | nonsynonymous | OV|1|469|0.00213 |
- | chr15 | 31619961 | 31619961 | G | C | exonic | KLF13 | synonymous | TGCT|1|155|0.00645 |
- | chr15 | 31664455 | 31664455 | C | T | exonic | KLF13 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr15 | 31619950 | 31619950 | G | C | exonic | KLF13 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr15 | 31670093 | 31670093 | C | T | UTR3 | KLF13 | unknown | SARC|1|247|0.00405 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|---|---|---|---|
KLF13 | Endometriosis | C13 | Disease or Syndrome | CTD_human |
KLF13 | Endometrioma | C13 | Neoplastic Process | CTD_human |
KLF13 | Chromosome 15q13.3 Microdeletion Syndrome | C10;C16;C23;F01;F03 | Congenital Abnormality | CTD_human |
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_NEGATIVE_REGULATION_OF_HOMEOSTATIC_PROCESS | BP | KLF13 |
GO_REGULATION_OF_CELL_DIFFERENTIATION | BP | KLF13 |
GO_REGULATION_OF_ERYTHROCYTE_DIFFERENTIATION | BP | KLF13 |
GO_REGULATORY_REGION_NUCLEIC_ACID_BINDING | MF | KLF13 |
GO_TRANSCRIPTIONAL_ACTIVATOR_ACTIVITY_RNA_POLYMERASE_II_CORE_PROMOTER_PROXIMAL_REGION_SEQUENCE_SPECIFIC_BINDING | MF | KLF13 |