Sample ID: | Sample_02_241 |
Biosample type: | Cell line |
Tissue type: | Colon |
Biosample name: | V456 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE77737 |
Cancer type: | colorectal cancer |
CRC number: | 886 |
TF number of all CRCs: | 46 |
TF list of all CRCs: | VDR, ELF3, RREB1, HNF1A, EHF, HNF4A, CDX2, TCF7L2, MYB, MAFK, FOS, TEAD1, RFX2, SREBF1, SMAD3, TGIF1, NR4A1, KLF16, KLF3, ASCL2, ATF3, FOXQ1, SOX13, NR4A2, MYC, FOXO3, CEBPB, PITX1, FOSL2, HES1, HNF1B, BHLHE40, JUNB, MEF2D, CEBPA, ETS2, ZBTB7A, MNT, FOSL1, SRF, KLF13, E2F3, SOX4, KLF4, SP3, GBX2 |
TF name | TF family | Frequency of TFs |
---|---|---|
ASCL2 | bHLH | 328 / 886 |
CDX2 | Homeobox | 607 / 886 |
EHF | ETS | 648 / 886 |
ELF3 | ETS | 886 / 886 |
FOS | TF_bZIP | 510 / 886 |
GBX2 | Homeobox | 20 / 886 |
HNF1A | Homeobox | 779 / 886 |
HNF4A | RXR-like | 631 / 886 |
MNT | bHLH | 98 / 886 |
RFX2 | RFX | 431 / 886 |
RREB1 | zf-C2H2 | 886 / 886 |
SREBF1 | bHLH | 430 / 886 |
VDR | THR-like | 886 / 886 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
RREB1 | 886 / 886 | zf-C2H2 | ENSG00000124782 |
ELF3 | 886 / 886 | ETS | ENSG00000163435 |
VDR | 886 / 886 | THR-like | ENSG00000111424 |
HNF1A | 779 / 886 | Homeobox | ENSG00000135100 |
EHF | 648 / 886 | ETS | ENSG00000135373 |
HNF4A | 631 / 886 | RXR-like | ENSG00000101076 |
CDX2 | 607 / 886 | Homeobox | ENSG00000165556 |
TCF7L2 | 580 / 886 | HMG | ENSG00000148737 |
MYB | 555 / 886 | MYB | ENSG00000118513 |
MAFK | 543 / 886 | TF_bZIP | ENSG00000198517 |
FOS | 510 / 886 | TF_bZIP | ENSG00000170345 |
TEAD1 | 456 / 886 | TEA | ENSG00000187079 |
RFX2 | 431 / 886 | RFX | ENSG00000087903 |
SMAD3 | 430 / 886 | MH1 | ENSG00000166949 |
SREBF1 | 430 / 886 | bHLH | ENSG00000072310 |
TGIF1 | 389 / 886 | Homeobox | ENSG00000177426 |
NR4A1 | 373 / 886 | NGFIB-like | ENSG00000123358 |
KLF16 | 343 / 886 | zf-C2H2 | ENSG00000129911 |
KLF3 | 342 / 886 | zf-C2H2 | ENSG00000109787 |
ASCL2 | 328 / 886 | bHLH | ENSG00000183734 |
ATF3 | 322 / 886 | TF_bZIP | ENSG00000162772 |
FOXQ1 | 322 / 886 | Fork_head | ENSG00000164379 |
SOX13 | 319 / 886 | HMG | ENSG00000143842 |
NR4A2 | 294 / 886 | NGFIB-like | ENSG00000153234 |
MYC | 279 / 886 | bHLH | ENSG00000136997 |
FOXO3 | 276 / 886 | Fork_head | ENSG00000118689 |
CEBPB | 274 / 886 | TF_bZIP | ENSG00000172216 |
PITX1 | 255 / 886 | Homeobox | ENSG00000069011 |
FOSL2 | 244 / 886 | TF_bZIP | ENSG00000075426 |
HES1 | 238 / 886 | bHLH | ENSG00000114315 |
HNF1B | 229 / 886 | Homeobox | ENSG00000275410 |
BHLHE40 | 208 / 886 | bHLH | ENSG00000134107 |
JUNB | 197 / 886 | TF_bZIP | ENSG00000171223 |
MEF2D | 185 / 886 | SRF | ENSG00000116604 |
CEBPA | 179 / 886 | TF_bZIP | ENSG00000245848 |
ETS2 | 169 / 886 | ETS | ENSG00000157557 |
ZBTB7A | 107 / 886 | ZBTB | ENSG00000178951 |
MNT | 98 / 886 | bHLH | ENSG00000070444 |
FOSL1 | 92 / 886 | TF_bZIP | ENSG00000175592 |
SRF | 87 / 886 | SRF | ENSG00000112658 |
KLF13 | 68 / 886 | zf-C2H2 | ENSG00000169926 |
E2F3 | 65 / 886 | E2F | ENSG00000112242 |
SOX4 | 59 / 886 | HMG | ENSG00000124766 |
KLF4 | 46 / 886 | zf-C2H2 | ENSG00000136826 |
SP3 | 34 / 886 | zf-C2H2 | ENSG00000172845 |
GBX2 | 20 / 886 | Homeobox | ENSG00000168505 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
SOX13 | 43 | 72 | 115 |
VDR | 48 | 74 | 122 |
HNF4A | 47 | 74 | 121 |
JUNB | 46 | 62 | 108 |
HNF1A | 46 | 73 | 119 |
SMAD3 | 45 | 73 | 118 |
FOXO3 | 41 | 74 | 115 |
MAFK | 46 | 72 | 118 |
RFX2 | 47 | 70 | 117 |
ELF3 | 48 | 74 | 122 |
PITX1 | 44 | 65 | 109 |
TEAD1 | 44 | 70 | 114 |
SOX4 | 37 | 70 | 107 |
RREB1 | 48 | 74 | 122 |
KLF13 | 32 | 69 | 101 |
GBX2 | 33 | 59 | 92 |
CEBPA | 48 | 55 | 103 |
KLF16 | 43 | 72 | 115 |
BHLHE40 | 44 | 67 | 111 |
MNT | 47 | 43 | 90 |
HNF1B | 46 | 64 | 110 |
KLF4 | 31 | 74 | 105 |
KLF3 | 45 | 67 | 112 |
FOSL2 | 48 | 58 | 106 |
FOSL1 | 37 | 66 | 103 |
MYC | 46 | 66 | 112 |
MYB | 45 | 72 | 117 |
FOXQ1 | 46 | 65 | 111 |
CEBPB | 47 | 57 | 104 |
SRF | 37 | 74 | 111 |
FOS | 48 | 65 | 113 |
NR4A2 | 43 | 72 | 115 |
NR4A1 | 46 | 66 | 112 |
EHF | 45 | 73 | 118 |
SP3 | 28 | 73 | 101 |
E2F3 | 32 | 72 | 104 |
CDX2 | 47 | 69 | 116 |
ZBTB7A | 45 | 50 | 95 |
ASCL2 | 43 | 74 | 117 |
TCF7L2 | 46 | 73 | 119 |
TGIF1 | 45 | 69 | 114 |
MEF2D | 44 | 65 | 109 |
HES1 | 47 | 57 | 104 |
SREBF1 | 45 | 71 | 116 |
ETS2 | 48 | 53 | 101 |
ATF3 | 47 | 61 | 108 |