TF information

TF name: HES1
TF family: bHLH
Ensembl gene ID: ENSG00000114315
Ensembl protein ID: ENSP00000232424
Entrez gene ID: 3280
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of HES1 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_01_001Cell lineProstate22Rv10.24697336561743
Sample_01_022Cell lineProstateC4-2B0.28571428571429
Sample_01_046Cell lineMammary GlandMCF-70.8
Sample_01_059Cell lineLungPC-90.4
Sample_02_007OtherCervicalcervical-cancer_vector0.059602649006623
Sample_02_021Cell lineColonV4290.32257134620928
Sample_02_079Cell lineMammary GlandT-47D_11
Sample_02_080Cell lineLungCalu-30.22727272727273
Sample_02_095Cell lineMammary GlandMDA-MB-4680.38832684824903
Sample_02_096Cell lineMammary GlandZR-75-1_10.96739130434783
Sample_02_116Cell lineMammary GlandMDA-MB-231_untreat0.16666666666667
Sample_02_164Cell lineLungH2087_Parental0.21666666666667
Sample_02_166Cell lineMammary GlandHCC1954_Parental0.504
Sample_02_168Cell lineProstateLNCaP0.19011406844106
Sample_02_184Cell lineSkinSKMEL300.18971061093248
Sample_02_187Cell lineStomachKATOIII0.33333333333333
Sample_02_191Cell lineStomachSNU7190.35714285714286
Sample_02_192Cell lineStomachMKN450.5
Sample_02_196Cell lineStomachNCC590.14285714285714
Sample_02_199Cell lineStomachKATO30.33333333333333
Sample_02_203Cell lineStomachYCC210.33333333333333
Sample_02_204Cell lineStomachIM950.27272727272727
Sample_02_205TissueStomachGastric_Primary_Sample_T0.13333333333333
Sample_02_208Cell lineStomachYCC30.75
Sample_02_220Cell lineBrainBE2C_10.16666666666667
Sample_02_227Cell lineOesophagusTE70.2
Sample_02_228Cell lineOesophagusKYSE5100.06430568499534
Sample_02_236Cell lineColonV2060.18840579710145
Sample_02_237Cell lineColonV3890.22278667402908
Sample_02_241Cell lineColonV4560.2686230248307
Sample_02_242Cell lineColonV4810.18989937832468
Sample_02_258OtherLungNCI-H1299_EGFP-NEO_reporter_cells_DMSO0.15555555555556
Sample_02_268Cell lineKidneyA-4980.061657744138822
Sample_02_280Cell lineMammary GlandSUM159_DMSO_24h0.125
Sample_02_285Cell lineLiverHuH7_untreat0.16724738675958
Sample_02_304Cell lineNeuroblastomaN2060.11005434782609
Sample_02_319Cell lineNeuroblastomaNB-EBc10.12138728323699
Sample_02_322Cell lineColonCaco-20.31224764468371
Sample_02_338Cell lineNeuroblastomaBE20.14705882352941
Sample_02_354Cell lineColonColo2050.15315315315315
Sample_02_356Cell lineColonSw4800.16129032258065
Sample_02_358Cell lineColonLS1800.23143759873618
Sample_02_361Cell lineColonHT29_DMSO0.29734513274336
Sample_02_394Cell lineMammary GlandT-47D_20.26923076923077
Sample_02_395Cell lineMammary GlandBT-5490.15272727272727
Sample_02_403Cell lineMammary GlandT-47D_untreat0.80681818181818
Sample_02_404Cell lineMammary GlandZR-75-1_20.76978417266187
Sample_02_424Cell lineColonSW6200.21739130434783
Sample_02_430Cell lineKidney123642840.28571428571429

HES1 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name
Sample_01_046Mammary GlandCell lineMCF-7
Sample_02_021ColonCell lineV429
Sample_02_079Mammary GlandCell lineT-47D_1
Sample_02_095Mammary GlandCell lineMDA-MB-468
Sample_02_096Mammary GlandCell lineZR-75-1_1
Sample_02_191StomachCell lineSNU719
Sample_02_192StomachCell lineMKN45
Sample_02_208StomachCell lineYCC3
Sample_02_358ColonCell lineLS180
Sample_02_361ColonCell lineHT29_DMSO
Sample_02_403Mammary GlandCell lineT-47D_untreat
Sample_02_404Mammary GlandCell lineZR-75-1_2

HES1 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with HES1
Download

Mutation of HES1
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of HES1

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr3193854767193854767GAexonicHES1synonymous UCEC|1|248|0.00403
-chr3193854477193854478GA-exonicHES1frameshift BLCA|1|396|0.00253
-chr3193855479193855479GAexonicHES1synonymous HNSC|1|512|0.00195
-chr3193855974193855974CGexonicHES1nonsynonymous THYM|1|123|0.00813
-chr3193854479193854479T-exonicHES1frameshift LIHC|1|373|0.00268
-chr3193855938193855938CTexonicHES1synonymous UCEC|1|248|0.00403
-chr3193854818193854818GAexonicHES1synonymous LIHC|1|373|0.00268,OV|1|469|0.00213
-chr3193855656193855656GAexonicHES1synonymous PAAD|1|185|0.00541
-chr3193854483193854483GAexonicHES1synonymous UCEC|1|248|0.00403
-chr3193855629193855629CTexonicHES1synonymous BLCA|1|396|0.00253,SKCM|1|368|0.00272
-chr3193854425193854425ATexonicHES1nonsynonymous LIHC|1|373|0.00268
-chr3193854273193854273GAexonicHES1nonsynonymous CESC|1|194|0.00515
-chr3193854477193854477GAexonicHES1synonymous BLCA|1|396|0.00253
-chr3193855740193855740CTexonicHES1synonymous CESC|1|194|0.00515
-chr3193854469193854469A-exonicHES1frameshift STAD|1|395|0.00253,STES|1|395|0.00253
-chr3193854190193854190GCexonicHES1nonsynonymous BLCA|1|396|0.00253
rs375649870chr3193855682193855682CTexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193855810193855810GAexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193854451193854451GAexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193854434193854434GAexonicHES1nonsynonymous BLCA|1|396|0.00253,BRCA|1|982|0.00102
rs770004050chr3193855643193855643ACexonicHES1nonsynonymous GBM|1|290|0.00345,GBMLGG|1|820|0.00122
-chr3193854764193854764CTexonicHES1synonymous ESCA|1|185|0.00541
-chr3193854182193854182ACexonicHES1nonsynonymous UCEC|1|248|0.00403
-chr3193855884193855884-GexonicHES1frameshift BLCA|1|396|0.00253
-chr3193855591193855591CGexonicHES1nonsynonymous CESC|1|194|0.00515
rs761011090chr3193855991193855991CTexonicHES1nonsynonymous OV|1|469|0.00213
-chr3193854779193854779-ACexonicHES1frameshift LUAD|1|543|0.00184
-chr3193854187193854187GCexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193855508193855508AGexonicHES1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr3193855609193855609-CexonicHES1frameshift BLCA|1|396|0.00253
-chr3193854814193854814AGexonicHES1nonsynonymous SKCM|1|368|0.00272
-chr3193854208193854208GAexonicHES1synonymous TGCT|1|155|0.00645
-chr3193855564193855564GCexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193854457193854457C-exonicHES1stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr3193854434193854434GTexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193855908193855908T-exonicHES1frameshift LUAD|1|543|0.00184
-chr3193855956193855956CAexonicHES1nonsynonymous BLCA|1|396|0.00253
-chr3193854799193854799TCexonicHES1nonsynonymous ESCA|1|185|0.00541
-chr3193854430193854430ATexonicHES1stopgain SKCM|1|368|0.00272

Disease information of HES1
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
HES1 Malignant neoplasm of breast C04;C17 Neoplastic Process CTD_human
HES1 Malignant tumor of colon C04;C06 Neoplastic Process CTD_human
HES1 Non-Small Cell Lung Carcinoma C04;C08 Neoplastic Process CTD_human
HES1 Uterine Cervical Neoplasm C04;C13 Neoplastic Process CTD_human
HES1 Colonic Neoplasms C04;C06 Neoplastic Process CTD_human
HES1 Glioblastoma C04 Neoplastic Process CTD_human
HES1 Lung Neoplasms C04;C08 Neoplastic Process CTD_human
HES1 Meningioma C04;C10 Neoplastic Process CTD_human
HES1 oligodendroglioma C04 Neoplastic Process CTD_human
HES1 Meningiomas, Multiple C04;C10 Neoplastic Process CTD_human
HES1 Neuroectodermal Tumor, Primitive C04 Neoplastic Process CTD_human
HES1 Malignant neoplasm of lung C04;C08 Neoplastic Process CTD_human
HES1 Malignant Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Adult Oligodendroglioma C04 Neoplastic Process CTD_human
HES1 Childhood Oligodendroglioma C04 Neoplastic Process CTD_human
HES1 Mixed Oligodendroglioma-Astrocytoma C04 Neoplastic Process CTD_human
HES1 Benign Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Spongioblastoma C04 Neoplastic Process CTD_human
HES1 Giant Cell Glioblastoma C04 Neoplastic Process CTD_human
HES1 Anaplastic Oligodendroglioma C04 Neoplastic Process CTD_human
HES1 Medulloepithelioma C04 Neoplastic Process CTD_human
HES1 Meningothelial meningioma C04;C10 Neoplastic Process CTD_human
HES1 Fibrous Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Psammomatous Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Angiomatous Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Hemangioblastic Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Hemangiopericytic Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Transitional Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Oligodendroblastoma C04 Neoplastic Process CTD_human
HES1 Spinal Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Intracranial Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Clear Cell Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Xanthomatous Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Breast Carcinoma C04;C17 Neoplastic Process CTD_human
HES1 Ependymoblastoma C04 Neoplastic Process CTD_human
HES1 Cerebral Convexity Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Parasagittal Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Mixed Oligodendroglioma-Ependymoma C04 Neoplastic Process CTD_human
HES1 Well Differentiated Oligodendroglioma C04 Neoplastic Process CTD_human
HES1 Lymphangioleiomyomatosis C04;C15;C20 Neoplastic Process CTD_human
HES1 Cerebral Primitive Neuroectodermal Tumor C04 Neoplastic Process CTD_human
HES1 Carcinoma, Pancreatic Ductal C04;C06;C19 Neoplastic Process CTD_human
HES1 Mammary Neoplasms, Human C04;C17 Neoplastic Process CTD_human
HES1 Intraorbital Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Intraventricular Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Olfactory Groove Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Secretory meningioma C04;C10 Neoplastic Process CTD_human
HES1 Microcystic meningioma C04;C10 Neoplastic Process CTD_human
HES1 Mammary Neoplasms C04;C17 Neoplastic Process CTD_human
HES1 Angioblastic Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Posterior Fossa Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Sphenoid Wing Meningioma C04;C10 Neoplastic Process CTD_human
HES1 Glioblastoma Multiforme C04 Neoplastic Process CTD_human
HES1 Papillary Meningioma C04;C10 Neoplastic Process CTD_human
HES1 cervical cancer C04;C13 Neoplastic Process CTD_human

Pathway associated with HES1
pathway_ID pathway_name pathway_source gene_number edge_number
pathway0000229 ATF-2 transcription factor network pid 59 451
pathway0000335 C-MYB transcription factor network pid 87 525
pathway0000483 Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants reactome 57 500
pathway0000484 Constitutive Signaling by NOTCH1 PEST Domain Mutants reactome 57 500
pathway0000752 Fanconi anemia pathway pid 48 794
pathway0001078 ID netpath 38 213
pathway0001516 Notch-mediated HES/HEY network pid 48 337
pathway0001517 Notch netpath 76 661
pathway0001524 NOTCH1 Intracellular Domain Regulates Transcription reactome 47 463
pathway0001526 NOTCH2 intracellular domain regulates transcription reactome 12 53
pathway0001837 Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells reactome 7 9
pathway0002393 Validated transcriptional targets of deltaNp63 isoforms pid 47 101
pathway0002589 Notch signaling pathway kegg 44 313
pathway0002631 Maturity onset diabetes of the young kegg 25 76
pathway0002825 Hs_Gene_regulatory_network_modelling_somitogenesis_WP2854_87527 wikipathways 12 26

Go term information of HES1
GO_term_name GO_term_type TF_name
GO_METANEPHRIC_NEPHRON_MORPHOGENESIS BP HES1
GO_LABYRINTHINE_LAYER_DEVELOPMENT BP HES1
GO_SOMATIC_STEM_CELL_POPULATION_MAINTENANCE BP HES1
GO_VENTRICULAR_SEPTUM_MORPHOGENESIS BP HES1
GO_NEGATIVE_REGULATION_OF_OLIGODENDROCYTE_DIFFERENTIATION BP HES1
GO_POSITIVE_REGULATION_OF_RESPONSE_TO_STIMULUS BP HES1
GO_ESTABLISHMENT_OF_EPITHELIAL_CELL_POLARITY BP HES1
GO_NEGATIVE_REGULATION_OF_GLIOGENESIS BP HES1
GO_METANEPHRIC_EPITHELIUM_DEVELOPMENT BP HES1
GO_SMOOTH_MUSCLE_CELL_DIFFERENTIATION BP HES1
GO_NEGATIVE_REGULATION_OF_STEM_CELL_DIFFERENTIATION BP HES1
GO_NEGATIVE_REGULATION_OF_GLIAL_CELL_DIFFERENTIATION BP HES1
GO_POSITIVE_REGULATION_OF_GLIAL_CELL_DIFFERENTIATION BP HES1
GO_POSITIVE_REGULATION_OF_NOTCH_SIGNALING_PATHWAY BP HES1
GO_THYMUS_DEVELOPMENT BP HES1
GO_PITUITARY_GLAND_DEVELOPMENT BP HES1
GO_ARTERY_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_T_CELL_PROLIFERATION BP HES1
GO_VASCULAR_SMOOTH_MUSCLE_CELL_DIFFERENTIATION BP HES1
GO_POSITIVE_REGULATION_OF_STAT_CASCADE BP HES1
GO_POSITIVE_REGULATION_OF_ORGANELLE_ORGANIZATION BP HES1
GO_CRANIAL_NERVE_DEVELOPMENT BP HES1
GO_INNER_EAR_RECEPTOR_STEREOCILIUM_ORGANIZATION BP HES1
GO_POSITIVE_REGULATION_OF_DNA_BINDING BP HES1
GO_REGULATION_OF_ORGAN_FORMATION BP HES1
GO_REGULATION_OF_ASTROCYTE_DIFFERENTIATION BP HES1
GO_FOREBRAIN_GENERATION_OF_NEURONS BP HES1
GO_PANCREAS_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_LEUKOCYTE_PROLIFERATION BP HES1
GO_CELL_MOTILITY BP HES1
GO_AORTA_DEVELOPMENT BP HES1
GO_REGULATION_OF_EPITHELIAL_CELL_DIFFERENTIATION BP HES1
GO_PLACENTA_BLOOD_VESSEL_DEVELOPMENT BP HES1
GO_EMBRYO_DEVELOPMENT BP HES1
GO_ESTABLISHMENT_OF_CELL_POLARITY BP HES1
GO_EPIDERMAL_CELL_DIFFERENTIATION BP HES1
GO_EMBRYONIC_PLACENTA_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_BMP_SIGNALING_PATHWAY BP HES1
GO_NEGATIVE_REGULATION_OF_HEMATOPOIETIC_PROGENITOR_CELL_DIFFERENTIATION BP HES1
GO_EMBRYONIC_HEART_TUBE_DEVELOPMENT BP HES1
GO_ARTERY_MORPHOGENESIS BP HES1
GO_REGULATION_OF_GLIAL_CELL_PROLIFERATION BP HES1
GO_CELL_DIFFERENTIATION_INVOLVED_IN_KIDNEY_DEVELOPMENT BP HES1
GO_CELL_MATURATION BP HES1
GO_REGULATION_OF_HEART_MORPHOGENESIS BP HES1
GO_REGULATION_OF_PEPTIDYL_TYROSINE_PHOSPHORYLATION BP HES1
GO_ROSTROCAUDAL_NEURAL_TUBE_PATTERNING BP HES1
GO_NEGATIVE_REGULATION_OF_GLIAL_CELL_PROLIFERATION BP HES1
GO_LABYRINTHINE_LAYER_BLOOD_VESSEL_DEVELOPMENT BP HES1
GO_RENAL_TUBULE_DEVELOPMENT BP HES1
GO_MIDBRAIN_DEVELOPMENT BP HES1
GO_GLOMERULUS_DEVELOPMENT BP HES1
GO_MESONEPHRIC_TUBULE_MORPHOGENESIS BP HES1
GO_STAT_CASCADE BP HES1
GO_REGULATION_OF_OLIGODENDROCYTE_DIFFERENTIATION BP HES1
GO_REGULATION_OF_INTRACELLULAR_PROTEIN_TRANSPORT BP HES1
GO_CARDIAC_VENTRICLE_DEVELOPMENT BP HES1
GO_AUDITORY_RECEPTOR_CELL_DIFFERENTIATION BP HES1
GO_CELL_MORPHOGENESIS_INVOLVED_IN_DIFFERENTIATION BP HES1
GO_METANEPHRIC_NEPHRON_DEVELOPMENT BP HES1
GO_EMBRYONIC_MORPHOGENESIS BP HES1
GO_NEGATIVE_REGULATION_OF_EPIDERMIS_DEVELOPMENT BP HES1
GO_REGULATION_OF_NOTCH_SIGNALING_PATHWAY BP HES1
GO_VENTRICULAR_SEPTUM_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_TYROSINE_PHOSPHORYLATION_OF_STAT3_PROTEIN BP HES1
GO_REGULATION_OF_EPIDERMAL_CELL_DIFFERENTIATION BP HES1
GO_REGULATION_OF_HEMATOPOIETIC_PROGENITOR_CELL_DIFFERENTIATION BP HES1
GO_NEURONAL_STEM_CELL_POPULATION_MAINTENANCE BP HES1
GO_MECHANORECEPTOR_DIFFERENTIATION BP HES1
GO_CELL_FATE_DETERMINATION BP HES1
GO_NEGATIVE_REGULATION_OF_EPIDERMAL_CELL_DIFFERENTIATION BP HES1
GO_HAIR_CELL_DIFFERENTIATION BP HES1
GO_POSITIVE_REGULATION_OF_PEPTIDYL_TYROSINE_PHOSPHORYLATION BP HES1
GO_RENAL_SYSTEM_VASCULATURE_DEVELOPMENT BP HES1
GO_COCHLEA_DEVELOPMENT BP HES1
GO_REGULATION_OF_CELL_PROLIFERATION_INVOLVED_IN_HEART_MORPHOGENESIS BP HES1
GO_HINDBRAIN_MORPHOGENESIS BP HES1
GO_PHARYNGEAL_SYSTEM_DEVELOPMENT BP HES1
GO_NEGATIVE_REGULATION_OF_EPITHELIAL_CELL_DIFFERENTIATION BP HES1
GO_SMOOTHENED_SIGNALING_PATHWAY BP HES1
GO_REGULATION_OF_DEVELOPMENT_HETEROCHRONIC BP HES1
GO_REGULATION_OF_GLIAL_CELL_DIFFERENTIATION BP HES1
GO_AUTONOMIC_NERVOUS_SYSTEM_DEVELOPMENT BP HES1
GO_NEUROEPITHELIAL_CELL_DIFFERENTIATION BP HES1
GO_ENDOCRINE_SYSTEM_DEVELOPMENT BP HES1
GO_REGULATION_OF_EMBRYONIC_DEVELOPMENT BP HES1
GO_CELL_PROJECTION_ORGANIZATION BP HES1
GO_STEM_CELL_DIFFERENTIATION BP HES1
GO_NEURON_FATE_COMMITMENT BP HES1
GO_REGULATION_OF_TYROSINE_PHOSPHORYLATION_OF_STAT3_PROTEIN BP HES1
GO_PLACENTA_DEVELOPMENT BP HES1
GO_CARDIAC_SEPTUM_MORPHOGENESIS BP HES1
GO_ADENOHYPOPHYSIS_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_EMBRYONIC_DEVELOPMENT BP HES1
GO_POSITIVE_REGULATION_OF_TRANSMEMBRANE_RECEPTOR_PROTEIN_SERINE_THREONINE_KINASE_SIGNALING_PATHWAY BP HES1
GO_REGULATION_OF_CELLULAR_PROTEIN_LOCALIZATION BP HES1
GO_PARASYMPATHETIC_NERVOUS_SYSTEM_DEVELOPMENT BP HES1
GO_AORTA_MORPHOGENESIS BP HES1
GO_EPITHELIAL_CELL_FATE_COMMITMENT BP HES1
GO_POSITIVE_REGULATION_OF_ASTROCYTE_DIFFERENTIATION BP HES1
GO_NEURAL_TUBE_PATTERNING BP HES1
GO_INNER_EAR_RECEPTOR_CELL_DEVELOPMENT BP HES1
GO_METANEPHROS_MORPHOGENESIS BP HES1
GO_POSITIVE_REGULATION_OF_GLIOGENESIS BP HES1
GO_HISTONE_DEACETYLASE_BINDING MF HES1
GO_REGULATORY_REGION_NUCLEIC_ACID_BINDING MF HES1
GO_CHAPERONE_BINDING MF HES1

Survival analysis of HES1



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of HES1