Sample ID: | Sample_02_404 |
Biosample type: | Cell line |
Tissue type: | Mammary Gland |
Biosample name: | ZR-75-1_2 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE69112 |
Cancer type: | Breast cancer |
CRC number: | 556 |
TF number of all CRCs: | 39 |
TF list of all CRCs: | SOX13, ELF3, GATA3, SPDEF, RARA, FOXA1, SOX9, IRX5, ZBTB7B, HES1, OSR2, HOXC10, RUNX1, EHF, SREBF1, TFAP2A, TFAP2B, SP2, ZNF263, RXRA, NR2F2, PBX1, SP3, PATZ1, ZBTB7C, TGIF1, ERF, ZNF217, NFIB, RREB1, JUNB, HOXC9, CEBPA, RFX5, IRX3, KLF16, GATA6, E4F1, XBP1 |
TF name | TF family | Frequency of TFs |
---|---|---|
EHF | ETS | 326 / 556 |
ELF3 | ETS | 556 / 556 |
ERF | ETS | 214 / 556 |
FOXA1 | Fork_head | 508 / 556 |
GATA3 | zf-GATA | 556 / 556 |
HES1 | bHLH | 428 / 556 |
IRX5 | Homeobox | 468 / 556 |
OSR2 | zf-C2H2 | 392 / 556 |
PBX1 | Homeobox | 244 / 556 |
RARA | THR-like | 508 / 556 |
RUNX1 | Runt | 332 / 556 |
SOX13 | HMG | 556 / 556 |
SOX9 | HMG | 476 / 556 |
SP2 | zf-C2H2 | 304 / 556 |
SPDEF | ETS | 556 / 556 |
SREBF1 | bHLH | 316 / 556 |
TFAP2A | AP-2 | 312 / 556 |
TFAP2B | AP-2 | 312 / 556 |
ZBTB7B | ZBTB | 428 / 556 |
ZNF217 | zf-C2H2 | 212 / 556 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
SOX13 | 556 / 556 | HMG | ENSG00000143842 |
SPDEF | 556 / 556 | ETS | ENSG00000124664 |
ELF3 | 556 / 556 | ETS | ENSG00000163435 |
GATA3 | 556 / 556 | zf-GATA | ENSG00000107485 |
RARA | 508 / 556 | THR-like | ENSG00000131759 |
FOXA1 | 508 / 556 | Fork_head | ENSG00000129514 |
SOX9 | 476 / 556 | HMG | ENSG00000125398 |
IRX5 | 468 / 556 | Homeobox | ENSG00000176842 |
ZBTB7B | 428 / 556 | ZBTB | ENSG00000160685 |
HES1 | 428 / 556 | bHLH | ENSG00000114315 |
OSR2 | 392 / 556 | zf-C2H2 | ENSG00000164920 |
HOXC10 | 344 / 556 | Homeobox | ENSG00000180818 |
RUNX1 | 332 / 556 | Runt | ENSG00000159216 |
EHF | 326 / 556 | ETS | ENSG00000135373 |
SREBF1 | 316 / 556 | bHLH | ENSG00000072310 |
TFAP2A | 312 / 556 | AP-2 | ENSG00000137203 |
TFAP2B | 312 / 556 | AP-2 | ENSG00000008196 |
SP2 | 304 / 556 | zf-C2H2 | ENSG00000167182 |
ZNF263 | 274 / 556 | zf-C2H2 | ENSG00000006194 |
RXRA | 256 / 556 | RXR-like | ENSG00000186350 |
NR2F2 | 256 / 556 | RXR-like | ENSG00000185551 |
PBX1 | 244 / 556 | Homeobox | ENSG00000185630 |
SP3 | 240 / 556 | zf-C2H2 | ENSG00000172845 |
PATZ1 | 232 / 556 | ZBTB | ENSG00000100105 |
ZBTB7C | 230 / 556 | ZBTB | ENSG00000184828 |
TGIF1 | 224 / 556 | Homeobox | ENSG00000177426 |
ERF | 214 / 556 | ETS | ENSG00000105722 |
ZNF217 | 212 / 556 | zf-C2H2 | ENSG00000171940 |
NFIB | 196 / 556 | CTF/NFI | ENSG00000147862 |
RREB1 | 193 / 556 | zf-C2H2 | ENSG00000124782 |
JUNB | 188 / 556 | TF_bZIP | ENSG00000171223 |
HOXC9 | 140 / 556 | Homeobox | ENSG00000180806 |
CEBPA | 136 / 556 | TF_bZIP | ENSG00000245848 |
RFX5 | 118 / 556 | RFX | ENSG00000143390 |
IRX3 | 116 / 556 | Homeobox | ENSG00000177508 |
KLF16 | 88 / 556 | zf-C2H2 | ENSG00000129911 |
GATA6 | 80 / 556 | zf-GATA | ENSG00000141448 |
E4F1 | 48 / 556 | zf-C2H2 | ENSG00000167967 |
XBP1 | 28 / 556 | TF_bZIP | ENSG00000100219 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
HOXC9 | 40 | 59 | 99 |
ZNF217 | 41 | 50 | 91 |
ERF | 41 | 48 | 89 |
SOX9 | 40 | 62 | 102 |
ELF3 | 41 | 63 | 104 |
RREB1 | 37 | 63 | 100 |
RARA | 40 | 63 | 103 |
CEBPA | 37 | 54 | 91 |
KLF16 | 36 | 60 | 96 |
TFAP2A | 39 | 63 | 102 |
TFAP2B | 39 | 64 | 103 |
NR2F2 | 37 | 58 | 95 |
RUNX1 | 40 | 64 | 104 |
ZNF263 | 38 | 64 | 102 |
IRX5 | 41 | 57 | 98 |
XBP1 | 40 | 47 | 87 |
JUNB | 39 | 52 | 91 |
ZBTB7C | 40 | 59 | 99 |
ZBTB7B | 39 | 61 | 100 |
SP2 | 37 | 62 | 99 |
SP3 | 37 | 63 | 100 |
RXRA | 39 | 63 | 102 |
OSR2 | 39 | 59 | 98 |
E4F1 | 39 | 32 | 71 |
HOXC10 | 40 | 62 | 102 |
SOX13 | 41 | 61 | 102 |
GATA6 | 33 | 49 | 82 |
PATZ1 | 37 | 62 | 99 |
GATA3 | 41 | 59 | 100 |
PBX1 | 41 | 57 | 98 |
NFIB | 39 | 54 | 93 |
EHF | 40 | 63 | 103 |
SPDEF | 41 | 63 | 104 |
FOXA1 | 40 | 59 | 99 |
SREBF1 | 41 | 59 | 100 |
IRX3 | 36 | 56 | 92 |
RFX5 | 35 | 60 | 95 |
HES1 | 40 | 58 | 98 |
TGIF1 | 38 | 61 | 99 |