Cancer CRCdb

TF information

TF name:	RXRA
TF family:	RXR-like
Ensembl gene ID:	ENSG00000186350
Ensembl protein ID:	ENSP00000419692
Entrez gene ID:	6256

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

Frequency of RXRA in all biosamples

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Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_01_022	Cell line	Prostate	C4-2B	0.78571428571429
Sample_01_046	Cell line	Mammary Gland	MCF-7	1
Sample_01_068	Cell line	Prostate: derived from metastatic site: vertebral metastasis	VCaP	0.54794520547945
Sample_02_007	Other	Cervical	cervical-cancer_vector	0.6953642384106
Sample_02_079	Cell line	Mammary Gland	T-47D_1	0.22222222222222
Sample_02_096	Cell line	Mammary Gland	ZR-75-1_1	1
Sample_02_115	Cell line	Mammary Gland	MCF-7	0.6
Sample_02_164	Cell line	Lung	H2087_Parental	0.98333333333333
Sample_02_166	Cell line	Mammary Gland	HCC1954_Parental	0.728
Sample_02_168	Cell line	Prostate	LNCaP	0.73384030418251
Sample_02_227	Cell line	Oesophagus	TE7	1
Sample_02_228	Cell line	Oesophagus	KYSE510	0.97949673811743
Sample_02_237	Cell line	Colon	V389	0.46751334437696
Sample_02_250	Tissue	Brain	tumormodel3691	0.625
Sample_02_254	Cell line	Neuroblastoma	IMR5-75	1
Sample_02_267	Cell line	Kidney	786-O	0.6
Sample_02_268	Cell line	Kidney	A-498	0.068303489016061
Sample_02_280	Cell line	Mammary Gland	SUM159_DMSO_24h	0.78333333333333
Sample_02_296	Cell line	Neuroblastoma	CLB-BER-Lud	0.3840856924254
Sample_02_300	Cell line	Neuroblastoma	CLB-PE	0.56410256410256
Sample_02_303	Cell line	Neuroblastoma	LAN1	0.45714285714286
Sample_02_307	Cell line	Neuroblastoma	SJNB12	0.3943661971831
Sample_02_308	Cell line	Neuroblastoma	SJNB1	0.34375
Sample_02_309	Cell line	Neuroblastoma	SJNB6	0.48815165876777
Sample_02_312	Cell line	Neuroblastoma	SK-N-BE_2-C	0.52659574468085
Sample_02_316	Cell line	Neuroblastoma	CHP212	0.48351648351648
Sample_02_354	Cell line	Colon	Colo205	0.5990990990991
Sample_02_361	Cell line	Colon	HT29_DMSO	0.34159292035398
Sample_02_394	Cell line	Mammary Gland	T-47D_2	0.30769230769231
Sample_02_403	Cell line	Mammary Gland	T-47D_untreat	0.59090909090909
Sample_02_404	Cell line	Mammary Gland	ZR-75-1_2	0.46043165467626

RXRA distribution in samples’ most representative CRC

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Sample ID	Tissue type	Biosample type	Biosample name
Sample_01_022	Prostate	Cell line	C4-2B
Sample_01_046	Mammary Gland	Cell line	MCF-7
Sample_01_068	Prostate: derived from metastatic site: vertebral metastasis	Cell line	VCaP
Sample_02_007	Cervical	Other	cervical-cancer_vector
Sample_02_096	Mammary Gland	Cell line	ZR-75-1_1
Sample_02_164	Lung	Cell line	H2087_Parental
Sample_02_166	Mammary Gland	Cell line	HCC1954_Parental
Sample_02_168	Prostate	Cell line	LNCaP
Sample_02_227	Oesophagus	Cell line	TE7
Sample_02_228	Oesophagus	Cell line	KYSE510
Sample_02_237	Colon	Cell line	V389
Sample_02_250	Brain	Tissue	tumormodel3691
Sample_02_254	Neuroblastoma	Cell line	IMR5-75
Sample_02_267	Kidney	Cell line	786-O
Sample_02_280	Mammary Gland	Cell line	SUM159_DMSO_24h
Sample_02_300	Neuroblastoma	Cell line	CLB-PE
Sample_02_312	Neuroblastoma	Cell line	SK-N-BE_2-C
Sample_02_316	Neuroblastoma	Cell line	CHP212
Sample_02_354	Colon	Cell line	Colo205
Sample_02_361	Colon	Cell line	HT29_DMSO
Sample_02_403	Mammary Gland	Cell line	T-47D_untreat

RXRA distribution in all CRCs

Genomic distribution of SEs associated with RXRA

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Mutation of RXRA

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Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of RXRA

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr9	137326002	137326002	A	G	exonic	RXRA	nonsynonymous	OV\|1\|469\|0.00213
-	chr9	137328510	137328510	A	G	UTR3	RXRA	unknown	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137328414	137328414	A	G	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137300036	137300036	C	T	exonic	RXRA	synonymous	LUSC\|1\|178\|0.00562
rs759299186	chr9	137321051	137321051	C	T	exonic	RXRA	synonymous	BLCA\|1\|396\|0.00253
-	chr9	137300876	137300876	A	T	exonic	RXRA	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr9	137328351	137328351	C	A	exonic	RXRA	nonsynonymous	BLCA\|2\|396\|0.00505,SARC\|1\|247\|0.00405
-	chr9	137313559	137313559	A	G	exonic	RXRA	nonsynonymous	PRAD\|1\|499\|0.00200
rs369993354	chr9	137331938	137331938	A	-	UTR3	RXRA	unknown	ESCA\|1\|185\|0.00541,SARC\|1\|247\|0.00405
-	chr9	137313586	137313586	G	-	exonic	RXRA	frameshift	BRCA\|1\|982\|0.00102
rs571766607	chr9	137300015	137300015	C	T	exonic	RXRA	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137330373	137330373	C	G	UTR3	RXRA	unknown	BRCA\|1\|982\|0.00102
rs368400425	chr9	137323779	137323779	C	T	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137300143	137300143	C	G	exonic	RXRA	stopgain	BLCA\|1\|396\|0.00253
-	chr9	137320990	137320990	G	A	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137321028	137321028	G	A	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	137300950	137300950	G	A	exonic	RXRA	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	137328392	137328392	C	T	exonic	RXRA	nonsynonymous	HNSC\|1\|512\|0.00195
rs764586715	chr9	137293638	137293638	G	A	exonic	RXRA	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
rs371715828	chr9	137309062	137309062	C	T	exonic	RXRA	synonymous	BRCA\|1\|982\|0.00102
-	chr9	137293577	137293577	C	T	exonic	RXRA	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	137313534	137313534	G	A	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137321010	137321010	G	A	exonic	RXRA	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr9	137320993	137320993	C	T	exonic	RXRA	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	137323760	137323760	G	T	exonic	RXRA	synonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
rs755663805	chr9	137325971	137325971	G	T	exonic	RXRA	nonsynonymous	UCEC\|1\|248\|0.00403
rs72554630	chr9	137313635	137313635	C	T	exonic	RXRA	synonymous	SKCM\|1\|368\|0.00272
-	chr9	137313626	137313626	C	T	exonic	RXRA	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137330534	137330534	G	C	UTR3	RXRA	unknown	SARC\|1\|247\|0.00405
-	chr9	137328312	137328312	G	T	splicing	RXRA	splicing	UCEC\|1\|248\|0.00403
-	chr9	137309042	137309042	G	T	exonic	RXRA	stopgain	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr9	137300902	137300902	C	T	exonic	RXRA	stopgain	SKCM\|1\|368\|0.00272
-	chr9	137313574	137313574	C	T	exonic	RXRA	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	137328442	137328442	G	T	exonic	RXRA	synonymous	COAD\|2\|367\|0.00545,COADREAD\|2\|489\|0.00409
-	chr9	137300845	137300845	C	T	exonic	RXRA	nonsynonymous	CESC\|1\|194\|0.00515
-	chr9	137320990	137320990	G	T	exonic	RXRA	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr9	137328331	137328331	C	G	exonic	RXRA	synonymous	BLCA\|1\|396\|0.00253
-	chr9	137321078	137321078	C	G	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	137328499	137328499	A	C	UTR3	RXRA	unknown	BRCA\|1\|982\|0.00102
-	chr9	137300855	137300855	T	C	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs777558913	chr9	137309085	137309085	C	T	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253,BRCA\|1\|982\|0.00102
-	chr9	137309139	137309139	A	T	exonic	RXRA	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr9	137293529	137293529	C	G	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
rs373205831	chr9	137321060	137321060	C	T	exonic	RXRA	synonymous	PRAD\|1\|499\|0.00200
rs749580298	chr9	137300844	137300844	G	A	exonic	RXRA	synonymous	BLCA\|1\|396\|0.00253
-	chr9	137293625	137293625	A	G	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137323832	137323832	C	T	exonic	RXRA	synonymous	THCA\|2\|504\|0.00397
-	chr9	137325968	137325968	C	T	exonic	RXRA	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
-	chr9	137328346	137328346	G	A	exonic	RXRA	synonymous	PAAD\|1\|185\|0.00541
rs756234164	chr9	137309069	137309069	G	A	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137300874	137300875	CA	-	exonic	RXRA	frameshift	BLCA\|1\|396\|0.00253
-	chr9	137293588	137293588	C	G	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	137293678	137293678	-	T	exonic	RXRA	frameshift	BLCA\|1\|396\|0.00253
-	chr9	137325961	137325961	C	G	exonic	RXRA	synonymous	ACC\|1\|90\|0.01111
-	chr9	137300832	137300832	C	T	exonic	RXRA	synonymous	BLCA\|1\|396\|0.00253
-	chr9	137293518	137293518	G	T	exonic	RXRA	synonymous	LUSC\|1\|178\|0.00562
-	chr9	137313646	137313646	G	A	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137300040	137300040	C	T	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137293648	137293648	G	T	exonic	RXRA	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	137293658	137293658	C	-	exonic	RXRA	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137300040	137300040	C	-	exonic	RXRA	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137331939	137331939	A	-	UTR3	RXRA	unknown	ESCA\|1\|185\|0.00541
rs759012790	chr9	137328340	137328340	G	A	exonic	RXRA	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137313652	137313652	G	T	splicing	RXRA	splicing	OV\|1\|469\|0.00213
-	chr9	137300121	137300121	G	A	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs754761323	chr9	137300061	137300061	G	A	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs763558005	chr9	137328357	137328357	G	T	exonic	RXRA	nonsynonymous	LUAD\|1\|543\|0.00184
rs755912201	chr9	137300039	137300039	-	C	exonic	RXRA	frameshift	STAD\|2\|395\|0.00506,STES\|2\|395\|0.00506
-	chr9	137293649	137293649	T	C	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	137313579	137313579	G	A	exonic	RXRA	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
rs143704037	chr9	137300027	137300027	C	T	exonic	RXRA	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137300887	137300887	C	G	exonic	RXRA	nonsynonymous	BLCA\|1\|396\|0.00253
rs760589666	chr9	137328325	137328325	C	G	exonic	RXRA	synonymous	BLCA\|1\|396\|0.00253
-	chr9	137325956	137325956	G	T	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137328449	137328449	C	T	exonic	RXRA	stopgain	BLCA\|1\|396\|0.00253
rs760095751	chr9	137321027	137321027	C	T	exonic	RXRA	synonymous	ESCA\|1\|185\|0.00541
-	chr9	137321072	137321072	C	T	exonic	RXRA	synonymous	UCEC\|1\|248\|0.00403
rs34683648	chr9	137293881	137293881	A	C	intronic	RXRA	unknown	BRCA\|1\|982\|0.00102
rs546006952	chr9	137330789	137330789	C	T	UTR3	RXRA	unknown	CESC\|1\|194\|0.00515
-	chr9	137326047	137326047	C	A	exonic	RXRA	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	137328407	137328407	C	T	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137330790	137330790	G	A	UTR3	RXRA	unknown	CESC\|1\|194\|0.00515
-	chr9	137328351	137328351	C	T	exonic	RXRA	nonsynonymous	BLCA\|12\|396\|0.03030,LIHC\|2\|373\|0.00536,PAAD\|1\|185\|0.00541
-	chr9	137328331	137328331	C	T	exonic	RXRA	synonymous	LUSC\|1\|178\|0.00562
-	chr9	137300840	137300840	C	T	exonic	RXRA	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137300846	137300846	G	A	exonic	RXRA	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	137328348	137328348	G	A	exonic	RXRA	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	137328399	137328399	G	A	exonic	RXRA	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	137309089	137309089	G	A	exonic	RXRA	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	137328333	137328333	G	A	exonic	RXRA	nonsynonymous	HNSC\|1\|512\|0.00195

Disease information of RXRA

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TF_name	Disease_name	Disease_class	Disease_semantic_type	TF_disease_source
RXRA	Prostatic Neoplasms	C04;C12	Neoplastic Process	CTD_human
RXRA	Thyroid Neoplasm	C04;C19	Neoplastic Process	CTD_human
RXRA	Sciatic Neuropathy	C10	Disease or Syndrome	CTD_human
RXRA	Thyroid Gland Follicular Adenoma	C04;C19	Neoplastic Process	CTD_human
RXRA	Lesion of Sciatic Nerve	C10	Disease or Syndrome	CTD_human
RXRA	Sciatic Neuritis	C10	Disease or Syndrome	CTD_human
RXRA	Malignant mesothelioma	C04;C08	Neoplastic Process	CTD_human
RXRA	Malignant neoplasm of prostate	C04;C12	Neoplastic Process	CTD_human
RXRA	Thyroid carcinoma	C04;C19	Neoplastic Process	CTD_human
RXRA	Neuralgia-Neuritis, Sciatic Nerve	C10	Disease or Syndrome	CTD_human
RXRA	Sciatic Nerve Palsy	C10	Disease or Syndrome	CTD_human
RXRA	AMYOTROPHIC LATERAL SCLEROSIS 1	C10;C18	Disease or Syndrome	CTD_human
RXRA	Amyotrophic Lateral Sclerosis, Sporadic	C10;C18	Disease or Syndrome	CTD_human

Pathway associated with RXRA

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pathway_ID	pathway_name	pathway_source	gene_number	edge_number
pathway0000044	a6b1 and a6b4 Integrin signaling	pid	46	383
pathway0000069	Activation of gene expression by SREBF (SREBP)	reactome	42	266
pathway0000316	BMAL1:CLOCK,NPAS2 activates circadian gene expression	reactome	42	282
pathway0000430	Circadian Clock	reactome	49	389
pathway0000664	Endogenous sterols	reactome	22	41
pathway0001140	Import of palmitoyl-CoA into the mitochondrial matrix	reactome	11	30
pathway0001815	Recycling of bile acids and salts	reactome	15	37
pathway0001825	Regulation of Androgen receptor activity	pid	54	338
pathway0001846	Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)	reactome	20	122
pathway0001853	Regulation of pyruvate dehydrogenase (PDH) complex	reactome	14	60
pathway0001883	Retinoic acid receptors-mediated signaling	pid	30	235
pathway0001940	RORA activates gene expression	reactome	27	204
pathway0001947	RXR and RAR heterodimerization with other nuclear receptor	pid	26	164
pathway0002028	Signaling by Retinoic Acid	reactome	20	78
pathway0002153	Synthesis of bile acids and bile salts	reactome	7	17
pathway0002155	Synthesis of bile acids and bile salts via 27-hydroxycholesterol	reactome	15	38
pathway0002156	Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol	reactome	24	87
pathway0002299	Transcriptional activation of mitochondrial biogenesis	reactome	43	230
pathway0002431	Vitamin D metabolism and pathway	panther	6	6
pathway0002460	YAP1- and WWTR1 (TAZ)-stimulated gene expression	reactome	29	144
pathway0002561	PPAR signaling pathway	kegg	67	520
pathway0002628	Adipocytokine signaling pathway	kegg	65	539
pathway0002663	Thyroid cancer	kegg	25	123
pathway0002669	Small cell lung cancer	kegg	83	807
pathway0002670	Non-small cell lung cancer	kegg	54	623

Go term information of RXRA

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GO_term_name	GO_term_type	TF_name
GO_REGULATION_OF_MORPHOGENESIS_OF_A_BRANCHING_STRUCTURE	BP	RXRA
GO_PROTEIN_HOMOTETRAMERIZATION	BP	RXRA
GO_VENTRICULAR_CARDIAC_MUSCLE_CELL_DIFFERENTIATION	BP	RXRA
GO_MODIFICATION_OF_MORPHOLOGY_OR_PHYSIOLOGY_OF_OTHER_ORGANISM	BP	RXRA
GO_REGULATION_OF_MYELINATION	BP	RXRA
GO_RESPONSE_TO_AXON_INJURY	BP	RXRA
GO_MUSCLE_CELL_PROLIFERATION	BP	RXRA
GO_AXON_REGENERATION	BP	RXRA
GO_POSITIVE_REGULATION_OF_TRANSLATIONAL_INITIATION	BP	RXRA
GO_HORMONE_MEDIATED_SIGNALING_PATHWAY	BP	RXRA
GO_VENTRICULAR_CARDIAC_MUSCLE_TISSUE_DEVELOPMENT	BP	RXRA
GO_MUSCLE_STRUCTURE_DEVELOPMENT	BP	RXRA
GO_MODIFICATION_BY_SYMBIONT_OF_HOST_MORPHOLOGY_OR_PHYSIOLOGY	BP	RXRA
GO_CARDIAC_MUSCLE_CELL_DIFFERENTIATION	BP	RXRA
GO_CARDIAC_MUSCLE_TISSUE_MORPHOGENESIS	BP	RXRA
GO_MUSCLE_ORGAN_MORPHOGENESIS	BP	RXRA
GO_ORGAN_GROWTH	BP	RXRA
GO_INTERACTION_WITH_HOST	BP	RXRA
GO_REGULATION_OF_REPRODUCTIVE_PROCESS	BP	RXRA
GO_BILE_ACID_AND_BILE_SALT_TRANSPORT	BP	RXRA
GO_CARDIAC_VENTRICLE_DEVELOPMENT	BP	RXRA
GO_CARDIAC_MUSCLE_TISSUE_DEVELOPMENT	BP	RXRA
GO_RESPONSE_TO_VITAMIN_A	BP	RXRA
GO_MODULATION_BY_VIRUS_OF_HOST_MORPHOLOGY_OR_PHYSIOLOGY	BP	RXRA
GO_RESPONSE_TO_VITAMIN_D	BP	RXRA
GO_NEURON_PROJECTION_REGENERATION	BP	RXRA
GO_MATERNAL_PROCESS_INVOLVED_IN_FEMALE_PREGNANCY	BP	RXRA
GO_STRIATED_MUSCLE_CELL_PROLIFERATION	BP	RXRA
GO_RESPONSE_TO_RETINOIC_ACID	BP	RXRA
GO_HEART_GROWTH	BP	RXRA
GO_EPITHELIAL_CELL_DIFFERENTIATION_INVOLVED_IN_PROSTATE_GLAND_DEVELOPMENT	BP	RXRA
GO_PROSTATE_GLAND_DEVELOPMENT	BP	RXRA
GO_POSITIVE_REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER_INVOLVED_IN_CELLULAR_RESPONSE_TO_CHEMICAL_STIMULUS	BP	RXRA
GO_MATERNAL_PLACENTA_DEVELOPMENT	BP	RXRA
GO_PROSTATE_GLANDULAR_ACINUS_DEVELOPMENT	BP	RXRA
GO_MIDGUT_DEVELOPMENT	BP	RXRA
GO_VITAMIN_METABOLIC_PROCESS	BP	RXRA
GO_RETINOIC_ACID_RECEPTOR_SIGNALING_PATHWAY	BP	RXRA
GO_CIRCULATORY_SYSTEM_DEVELOPMENT	BP	RXRA
GO_EMBRYO_IMPLANTATION	BP	RXRA
GO_GLANDULAR_EPITHELIAL_CELL_DIFFERENTIATION	BP	RXRA
GO_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_COMPLEX	CC	RXRA
GO_TRANSCRIPTION_FACTOR_COMPLEX	CC	RXRA
GO_NUCLEAR_TRANSCRIPTION_FACTOR_COMPLEX	CC	RXRA
GO_TRANSCRIPTION_FACTOR_ACTIVITY_DIRECT_LIGAND_REGULATED_SEQUENCE_SPECIFIC_DNA_BINDING	MF	RXRA
GO_REGULATORY_REGION_NUCLEIC_ACID_BINDING	MF	RXRA
GO_STEROID_HORMONE_RECEPTOR_ACTIVITY	MF	RXRA
GO_VITAMIN_D_RECEPTOR_BINDING	MF	RXRA
GO_RETINOIC_ACID_RECEPTOR_BINDING	MF	RXRA
GO_STRUCTURE_SPECIFIC_DNA_BINDING	MF	RXRA

Survival analysis of RXRA

Methods

Overall Survival

Disease Free Survival (RFS)

Group Cutoff

Median

Quartile

Custom

Cutoff-High(%)

Hazards Ratio (HR) Calculate the hazards ratio based on Cox PH Model.

95% Confidence Interval Add the 95% CI as dotted line.

Axis Units

Expression of RXRA

Pan cancer (TCGA) Cell line (ENCODE) In vitro differentiated cell (ENCODE) Primary cell (ENCODE) Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)