Sample overview of tumormodel3691

Sample ID: Sample_02_250
Biosample type: Tissue
Tissue type: Brain
Biosample name: tumormodel3691
Data source: NCBI GEO/SRA
GSE ID: GSE79734
Cancer type: Glioblastomas
CRC number: 32
TF number of all CRCs: 21
TF list of all CRCs: SOX13, SREBF1, POU3F3, POU3F2, SOX8, SOX2, KLF16, RXRA, MYC, NR2F1, ZIC1, ZNF219, ZNF217, ZBTB7B, ERF, HOXC9, TCF4, HOXB3, NFIX, OLIG2, HOXB2

The most representative CRC of tumormodel3691
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Relationship plot of CRC model
TF number of this CRC: 10
CRC socre: 22.9
TF list of the most representative CRC
TF name TF family Frequency of TFs
KLF16 zf-C2H2 21 / 32
POU3F2 Pou 28 / 32
POU3F3 Pou 32 / 32
RXRA RXR-like 20 / 32
SOX13 HMG 32 / 32
SOX2 HMG 21 / 32
SOX8 HMG 22 / 32
SREBF1 bHLH 32 / 32
ZNF217 zf-C2H2 10 / 32
ZNF219 zf-C2H2 11 / 32

All CRCs of tumormodel3691
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CRC rank TF list of CRCs CRC score TF number of CRC Detail of CRC

Frequency of TFs that appear in CRCs
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TF name Frequency of TFs TF family Ensembl ID
POU3F3 32 / 32 Pou ENSG00000198914
SOX13 32 / 32 HMG ENSG00000143842
SREBF1 32 / 32 bHLH ENSG00000072310
POU3F2 28 / 32 Pou ENSG00000184486
SOX8 22 / 32 HMG ENSG00000005513
KLF16 21 / 32 zf-C2H2 ENSG00000129911
SOX2 21 / 32 HMG ENSG00000181449
RXRA 20 / 32 RXR-like ENSG00000186350
MYC 17 / 32 bHLH ENSG00000136997
NR2F1 12 / 32 RXR-like ENSG00000175745
ZIC1 12 / 32 zf-C2H2 ENSG00000152977
ZNF219 11 / 32 zf-C2H2 ENSG00000165804
ZBTB7B 10 / 32 ZBTB ENSG00000160685
ZNF217 10 / 32 zf-C2H2 ENSG00000171940
ERF 9 / 32 ETS ENSG00000105722
HOXC9 8 / 32 Homeobox ENSG00000180806
TCF4 7 / 32 bHLH ENSG00000196628
HOXB3 5 / 32 Homeobox ENSG00000120093
NFIX 4 / 32 CTF/NFI ENSG00000008441
HOXB2 3 / 32 Homeobox ENSG00000173917
OLIG2 3 / 32 bHLH ENSG00000205927

Indegree and outdegree of TFs
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TF name Indegree Outdegree Node connections
HOXC9 18 32 50
ZNF217 18 32 50
POU3F2 23 36 59
ZNF219 16 37 53
SOX8 22 37 59
SOX2 22 37 59
KLF16 20 37 57
SOX13 24 35 59
NR2F1 20 34 54
ZIC1 22 34 56
MYC 23 32 55
POU3F3 24 37 61
TCF4 22 29 51
ZBTB7B 22 32 54
HOXB2 19 23 42
HOXB3 16 32 48
RXRA 22 34 56
OLIG2 22 19 41
ERF 21 26 47
SREBF1 24 36 60
NFIX 23 20 43

Expression of TFs in all CRCs