Sample ID: | Sample_01_068 |
Biosample type: | Cell line |
Tissue type: | Prostate: derived from metastatic site: vertebral metastasis |
Biosample name: | VCaP |
Data source: | ENCODE |
GSE ID: | GSE105760|GSE105846 |
Cancer type: | prostate adenocarcinoma |
CRC number: | 73 |
TF number of all CRCs: | 22 |
TF list of all CRCs: | SPDEF, EHF, FOXA1, NR2F2, RXRA, ZBTB16, AR, SOX9, NKX3-1, MYC, HOXB13, SP3, E2F3, NR4A1, ZNF350, ELK4, KLF4, NKX2-2, MSX2, ZBTB7B, ZNF217, BACH1 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
SPDEF | 64 / 73 | ETS | ENSG00000124664 |
EHF | 48 / 73 | ETS | ENSG00000135373 |
FOXA1 | 46 / 73 | Fork_head | ENSG00000129514 |
NR2F2 | 42 / 73 | RXR-like | ENSG00000185551 |
RXRA | 40 / 73 | RXR-like | ENSG00000186350 |
ZBTB16 | 38 / 73 | ZBTB | ENSG00000109906 |
AR | 37 / 73 | ESR-like | ENSG00000169083 |
SOX9 | 34 / 73 | HMG | ENSG00000125398 |
HOXB13 | 27 / 73 | Homeobox | ENSG00000159184 |
MYC | 27 / 73 | bHLH | ENSG00000136997 |
NKX3-1 | 27 / 73 | Homeobox | ENSG00000167034 |
SP3 | 26 / 73 | zf-C2H2 | ENSG00000172845 |
E2F3 | 24 / 73 | E2F | ENSG00000112242 |
NR4A1 | 19 / 73 | NGFIB-like | ENSG00000123358 |
ZNF350 | 18 / 73 | zf-C2H2 | ENSG00000256683 |
ELK4 | 18 / 73 | ETS | ENSG00000158711 |
KLF4 | 10 / 73 | zf-C2H2 | ENSG00000136826 |
NKX2-2 | 10 / 73 | Homeobox | ENSG00000125820 |
MSX2 | 9 / 73 | Homeobox | ENSG00000120149 |
ZBTB7B | 8 / 73 | ZBTB | ENSG00000160685 |
ZNF217 | 7 / 73 | zf-C2H2 | ENSG00000171940 |
BACH1 | 4 / 73 | TF_bZIP | ENSG00000156273 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ZNF217 | 21 | 17 | 38 |
NKX2-2 | 16 | 27 | 43 |
ZBTB16 | 22 | 31 | 53 |
BACH1 | 14 | 26 | 40 |
NR2F2 | 21 | 29 | 50 |
KLF4 | 14 | 31 | 45 |
MYC | 22 | 29 | 51 |
NR4A1 | 21 | 28 | 49 |
NKX3-1 | 20 | 30 | 50 |
ZBTB7B | 17 | 25 | 42 |
SP3 | 21 | 29 | 50 |
RXRA | 21 | 34 | 55 |
EHF | 21 | 34 | 55 |
AR | 20 | 33 | 53 |
MSX2 | 14 | 29 | 43 |
HOXB13 | 19 | 30 | 49 |
E2F3 | 18 | 30 | 48 |
SPDEF | 23 | 34 | 57 |
FOXA1 | 23 | 32 | 55 |
SOX9 | 20 | 35 | 55 |
ZNF350 | 23 | 24 | 47 |
ELK4 | 19 | 25 | 44 |