Cancer CRCdb

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_01_068	Cell line	Prostate: derived from metastatic site: vertebral metastasis	VCaP	0.24657534246575

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of ZNF350

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr19	52468933	52468933	C	T	exonic	ZNF350	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr19	52468457	52468457	G	A	exonic	ZNF350	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr19	52468952	52468952	G	A	exonic	ZNF350	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr19	52468677	52468677	C	A	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52468639	52468639	G	T	exonic	ZNF350	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs542665274	chr19	52468332	52468332	G	A	exonic	ZNF350	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr19	52472315	52472315	G	A	exonic	ZNF350	stopgain	BRCA\|1\|982\|0.00102
rs267605627	chr19	52477607	52477607	G	A	exonic	ZNF350	stopgain	BLCA\|1\|396\|0.00253
-	chr19	52468138	52468138	T	C	exonic	ZNF350	nonsynonymous	LUAD\|1\|543\|0.00184
rs759397835	chr19	52468188	52468188	G	A	exonic	ZNF350	synonymous	LUSC\|1\|178\|0.00562
rs777940934	chr19	52468462	52468462	G	A	exonic	ZNF350	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr19	52468595	52468595	C	A	exonic	ZNF350	stopgain	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs781302955	chr19	52468777	52468777	C	T	exonic	ZNF350	nonsynonymous	COAD\|3\|367\|0.00817,COADREAD\|3\|489\|0.00613
rs753952350	chr19	52468256	52468256	C	T	exonic	ZNF350	nonsynonymous	CESC\|2\|194\|0.01031
-	chr19	52469258	52469258	C	T	exonic	ZNF350	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr19	52468574	52468574	C	G	exonic	ZNF350	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr19	52468975	52468975	G	A	exonic	ZNF350	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs745348588	chr19	52468942	52468942	G	C	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52468553	52468553	T	C	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52468329	52468329	C	T	exonic	ZNF350	synonymous	LIHC\|1\|373\|0.00268
-	chr19	52469415	52469415	C	G	exonic	ZNF350	synonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
-	chr19	52469017	52469017	C	T	exonic	ZNF350	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr19	52468721	52468721	G	A	exonic	ZNF350	stopgain	BRCA\|1\|982\|0.00102
rs770149500	chr19	52469108	52469108	G	A	exonic	ZNF350	stopgain	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr19	52468815	52468815	T	-	exonic	ZNF350	frameshift	LIHC\|1\|373\|0.00268
-	chr19	52468317	52468317	T	A	exonic	ZNF350	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr19	52468837	52468837	T	C	exonic	ZNF350	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr19	52469366	52469366	G	A	exonic	ZNF350	nonsynonymous	CESC\|1\|194\|0.00515
-	chr19	52469189	52469189	G	A	exonic	ZNF350	nonsynonymous	LUAD\|1\|543\|0.00184,SKCM\|2\|368\|0.00543
-	chr19	52468200	52468200	T	C	exonic	ZNF350	synonymous	PAAD\|1\|185\|0.00541
rs759224562	chr19	52468277	52468277	C	T	exonic	ZNF350	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr19	52468875	52468875	G	C	exonic	ZNF350	synonymous	BLCA\|1\|396\|0.00253
rs753876989	chr19	52469195	52469195	G	A	exonic	ZNF350	stopgain	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs150778438	chr19	52468501	52468501	T	C	exonic	ZNF350	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr19	52468506	52468506	T	C	exonic	ZNF350	synonymous	HNSC\|1\|512\|0.00195
-	chr19	52469050	52469050	G	T	exonic	ZNF350	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr19	52469393	52469393	C	A	exonic	ZNF350	stopgain	PAAD\|1\|185\|0.00541
-	chr19	52468935	52468935	T	A	exonic	ZNF350	synonymous	LUAD\|1\|543\|0.00184
-	chr19	52469055	52469055	C	G	exonic	ZNF350	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr19	52472376	52472376	T	C	exonic	ZNF350	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr19	52471832	52471832	T	C	exonic	ZNF350	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr19	52472367	52472367	C	A	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52472333	52472333	G	T	exonic	ZNF350	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr19	52469210	52469210	G	A	exonic	ZNF350	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr19	52468196	52468196	C	A	exonic	ZNF350	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr19	52468850	52468850	C	A	exonic	ZNF350	stopgain	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr19	52469263	52469263	C	T	exonic	ZNF350	nonsynonymous	STAD\|2\|395\|0.00506,STES\|2\|395\|0.00506
-	chr19	52472379	52472379	G	C	exonic	ZNF350	synonymous	BRCA\|1\|982\|0.00102
-	chr19	52468751	52468751	T	C	exonic	ZNF350	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr19	52468450	52468450	T	C	exonic	ZNF350	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr19	52468795	52468795	T	G	exonic	ZNF350	nonsynonymous	LIHC\|1\|373\|0.00268
rs138780746	chr19	52469194	52469194	C	T	exonic	ZNF350	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253,UCEC\|1\|248\|0.00403
-	chr19	52472344	52472344	C	T	exonic	ZNF350	stopgain	LUAD\|1\|543\|0.00184
-	chr19	52468865	52468865	G	A	exonic	ZNF350	stopgain	CESC\|1\|194\|0.00515
rs199891932	chr19	52471908	52471908	G	A	exonic	ZNF350	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr19	52468703	52468703	C	T	exonic	ZNF350	nonsynonymous	HNSC\|1\|512\|0.00195
rs148220969	chr19	52468148	52468148	C	T	exonic	ZNF350	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355,UCEC\|1\|248\|0.00403
-	chr19	52468408	52468408	T	G	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52471879	52471879	C	T	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr19	52469330	52469330	G	A	exonic	ZNF350	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr19	52471868	52471868	C	G	exonic	ZNF350	nonsynonymous	BRCA\|1\|982\|0.00102
rs138981906	chr19	52468945	52468945	C	T	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
rs566120255	chr19	52468609	52468609	C	A	exonic	ZNF350	nonsynonymous	UCEC\|1\|248\|0.00403
rs551559152	chr19	52472356	52472356	A	C	exonic	ZNF350	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr19	52469105	52469105	T	G	exonic	ZNF350	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr19	52472325	52472325	C	A	exonic	ZNF350	synonymous	LIHC\|1\|373\|0.00268
-	chr19	52472297	52472297	C	A	exonic	ZNF350	nonsynonymous	LUAD\|1\|543\|0.00184

TF name:	ZNF350
TF family:	zf-C2H2
Ensembl gene ID:	ENSG00000256683
Ensembl protein ID:	ENSP00000243644
Entrez gene ID:	59348

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

GO_term_name	GO_term_type	TF_name
GO_TRANSCRIPTIONAL_REPRESSOR_COMPLEX	CC	ZNF350
GO_INTRONIC_TRANSCRIPTION_REGULATORY_REGION_DNA_BINDING	MF	ZNF350

TF information

TCGA somatic mutations and clinical variants of ZNF350

Survival analysis of ZNF350

Expression of ZNF350