Sample ID: | Sample_02_308 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | SJNB1 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 64 |
TF number of all CRCs: | 23 |
TF list of all CRCs: | KLF7, RARA, GATA3, KLF13, PHOX2B, JUND, TBX2, JUNB, MEF2D, PHOX2A, TLX2, MEIS1, RXRA, ZBTB7B, GATA2, ARID3A, JUN, SOX4, KLF3, PROX1, TGIF1, NFE2L1, NFIB |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
KLF7 | 63 / 64 | zf-C2H2 | ENSG00000118263 |
RARA | 57 / 64 | THR-like | ENSG00000131759 |
GATA3 | 40 / 64 | zf-GATA | ENSG00000107485 |
KLF13 | 35 / 64 | zf-C2H2 | ENSG00000169926 |
PHOX2B | 35 / 64 | Homeobox | ENSG00000109132 |
JUND | 34 / 64 | TF_bZIP | ENSG00000130522 |
TBX2 | 32 / 64 | T-box | ENSG00000121068 |
JUNB | 30 / 64 | TF_bZIP | ENSG00000171223 |
MEF2D | 26 / 64 | SRF | ENSG00000116604 |
PHOX2A | 26 / 64 | Homeobox | ENSG00000165462 |
MEIS1 | 23 / 64 | Homeobox | ENSG00000143995 |
TLX2 | 23 / 64 | Homeobox | ENSG00000115297 |
RXRA | 22 / 64 | RXR-like | ENSG00000186350 |
ZBTB7B | 21 / 64 | ZBTB | ENSG00000160685 |
GATA2 | 19 / 64 | zf-GATA | ENSG00000179348 |
ARID3A | 15 / 64 | ARID | ENSG00000116017 |
JUN | 14 / 64 | TF_bZIP | ENSG00000177606 |
KLF3 | 8 / 64 | zf-C2H2 | ENSG00000109787 |
SOX4 | 8 / 64 | HMG | ENSG00000124766 |
PROX1 | 6 / 64 | HPD | ENSG00000117707 |
NFE2L1 | 4 / 64 | TF_bZIP | ENSG00000082641 |
TGIF1 | 4 / 64 | Homeobox | ENSG00000177426 |
NFIB | 1 / 64 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
JUNB | 28 | 33 | 61 |
JUND | 24 | 41 | 65 |
TBX2 | 23 | 37 | 60 |
SOX4 | 12 | 41 | 53 |
RARA | 27 | 44 | 71 |
NFE2L1 | 24 | 25 | 49 |
JUN | 22 | 39 | 61 |
MEIS1 | 26 | 38 | 64 |
KLF7 | 25 | 38 | 63 |
KLF3 | 23 | 32 | 55 |
PROX1 | 27 | 20 | 47 |
KLF13 | 25 | 40 | 65 |
ZBTB7B | 22 | 33 | 55 |
RXRA | 24 | 40 | 64 |
PHOX2A | 28 | 34 | 62 |
PHOX2B | 28 | 37 | 65 |
GATA2 | 23 | 29 | 52 |
GATA3 | 23 | 40 | 63 |
ARID3A | 20 | 42 | 62 |
NFIB | 7 | 26 | 33 |
TLX2 | 21 | 41 | 62 |
MEF2D | 27 | 33 | 60 |
TGIF1 | 14 | 39 | 53 |