Sample ID: | Sample_02_312 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | SK-N-BE_2-C |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 188 |
TF number of all CRCs: | 34 |
TF list of all CRCs: | HOXC9, MEIS2, RARA, TEAD1, HOXC4, HOXC6, TEF, PHOX2B, KLF13, HOXC8, RXRA, GATA3, MEF2D, PHOX2A, KLF7, HOXC5, TBX2, TFAP2B, TCF4, CREB1, ESRRG, TCF7L2, MAZ, GATA2, ISL1, SREBF2, TCF12, ZNF217, PROX1, E2F2, CEBPG, SIX3, SHOX2, NFIB |
TF name | TF family | Frequency of TFs |
---|---|---|
ESRRG | ESR-like | 56 / 188 |
GATA3 | zf-GATA | 98 / 188 |
HOXC4 | Homeobox | 141 / 188 |
HOXC6 | Homeobox | 126 / 188 |
HOXC8 | Homeobox | 104 / 188 |
HOXC9 | Homeobox | 188 / 188 |
KLF13 | zf-C2H2 | 113 / 188 |
KLF7 | zf-C2H2 | 93 / 188 |
MEF2D | SRF | 97 / 188 |
MEIS2 | Homeobox | 173 / 188 |
PHOX2A | Homeobox | 97 / 188 |
PHOX2B | Homeobox | 114 / 188 |
RARA | THR-like | 156 / 188 |
RXRA | RXR-like | 99 / 188 |
TEAD1 | TEA | 146 / 188 |
TEF | TF_bZIP | 115 / 188 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
HOXC9 | 188 / 188 | Homeobox | ENSG00000180806 |
MEIS2 | 173 / 188 | Homeobox | ENSG00000134138 |
RARA | 156 / 188 | THR-like | ENSG00000131759 |
TEAD1 | 146 / 188 | TEA | ENSG00000187079 |
HOXC4 | 141 / 188 | Homeobox | ENSG00000198353 |
HOXC6 | 126 / 188 | Homeobox | ENSG00000197757 |
TEF | 115 / 188 | TF_bZIP | ENSG00000167074 |
PHOX2B | 114 / 188 | Homeobox | ENSG00000109132 |
KLF13 | 113 / 188 | zf-C2H2 | ENSG00000169926 |
HOXC8 | 104 / 188 | Homeobox | ENSG00000037965 |
RXRA | 99 / 188 | RXR-like | ENSG00000186350 |
GATA3 | 98 / 188 | zf-GATA | ENSG00000107485 |
PHOX2A | 97 / 188 | Homeobox | ENSG00000165462 |
MEF2D | 97 / 188 | SRF | ENSG00000116604 |
KLF7 | 93 / 188 | zf-C2H2 | ENSG00000118263 |
HOXC5 | 91 / 188 | Homeobox | ENSG00000172789 |
TBX2 | 74 / 188 | T-box | ENSG00000121068 |
TFAP2B | 66 / 188 | AP-2 | ENSG00000008196 |
TCF4 | 64 / 188 | bHLH | ENSG00000196628 |
CREB1 | 63 / 188 | TF_bZIP | ENSG00000118260 |
ESRRG | 56 / 188 | ESR-like | ENSG00000196482 |
TCF7L2 | 48 / 188 | HMG | ENSG00000148737 |
MAZ | 45 / 188 | zf-C2H2 | ENSG00000103495 |
GATA2 | 34 / 188 | zf-GATA | ENSG00000179348 |
ISL1 | 32 / 188 | Homeobox | ENSG00000016082 |
SREBF2 | 28 / 188 | bHLH | ENSG00000198911 |
TCF12 | 28 / 188 | bHLH | ENSG00000140262 |
ZNF217 | 19 / 188 | zf-C2H2 | ENSG00000171940 |
PROX1 | 17 / 188 | HPD | ENSG00000117707 |
E2F2 | 17 / 188 | E2F | ENSG00000007968 |
CEBPG | 15 / 188 | TF_bZIP | ENSG00000153879 |
SIX3 | 8 / 188 | Homeobox | ENSG00000138083 |
SHOX2 | 6 / 188 | Homeobox | ENSG00000168779 |
NFIB | 2 / 188 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
HOXC9 | 42 | 57 | 99 |
HOXC8 | 42 | 50 | 92 |
ZNF217 | 37 | 39 | 76 |
TCF4 | 42 | 49 | 91 |
ISL1 | 41 | 48 | 89 |
HOXC5 | 42 | 49 | 91 |
HOXC4 | 42 | 49 | 91 |
HOXC6 | 42 | 51 | 93 |
TBX2 | 32 | 57 | 89 |
TEAD1 | 40 | 55 | 95 |
RARA | 40 | 58 | 98 |
CEBPG | 41 | 28 | 69 |
PROX1 | 40 | 28 | 68 |
TFAP2B | 38 | 52 | 90 |
MEIS2 | 41 | 57 | 98 |
TEF | 37 | 59 | 96 |
SIX3 | 28 | 44 | 72 |
KLF7 | 39 | 54 | 93 |
PHOX2B | 41 | 54 | 95 |
KLF13 | 38 | 53 | 91 |
ESRRG | 33 | 54 | 87 |
TCF12 | 29 | 55 | 84 |
RXRA | 41 | 57 | 98 |
CREB1 | 38 | 47 | 85 |
SHOX2 | 24 | 48 | 72 |
PHOX2A | 39 | 55 | 94 |
GATA2 | 37 | 50 | 87 |
GATA3 | 40 | 56 | 96 |
NFIB | 22 | 45 | 67 |
E2F2 | 27 | 49 | 76 |
MAZ | 36 | 56 | 92 |
TCF7L2 | 31 | 57 | 88 |
SREBF2 | 31 | 52 | 83 |
MEF2D | 39 | 54 | 93 |