TF information

TF name: ISL1
TF family: Homeobox
Ensembl gene ID: ENSG00000016082
Ensembl protein ID: ENSP00000230658, ENSP00000422676
Entrez gene ID: 3670
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of ISL1 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_220Cell lineBrainBE2C_10.16666666666667
Sample_02_296Cell lineNeuroblastomaCLB-BER-Lud0.20811017597552
Sample_02_298Cell lineNeuroblastomaCLB-GA0.28767123287671
Sample_02_299Cell lineNeuroblastomaCLB-MA0.10551558752998
Sample_02_302Cell lineNeuroblastomaIMR320.25
Sample_02_304Cell lineNeuroblastomaN2060.12771739130435
Sample_02_309Cell lineNeuroblastomaSJNB60.056872037914692
Sample_02_310Cell lineNeuroblastomaSJNB80.065530799475754
Sample_02_312Cell lineNeuroblastomaSK-N-BE_2-C0.17021276595745
Sample_02_313Cell lineNeuroblastomaSK-N-DZ0.14671814671815
Sample_02_314Cell lineNeuroblastomaSK-N-FI0.22222222222222
Sample_02_316Cell lineNeuroblastomaCHP2120.076923076923077
Sample_02_318Cell lineNeuroblastomaNB690.3046875
Sample_02_319Cell lineNeuroblastomaNB-EBc10.063583815028902
Sample_02_338Cell lineNeuroblastomaBE20.13235294117647

ISL1 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name
Sample_02_314NeuroblastomaCell lineSK-N-FI

ISL1 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with ISL1
Download

Mutation of ISL1
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of ISL1

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr55068337850683378CAexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068351950683519GTexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068566150685661CTexonicISL1synonymous HNSC|1|512|0.00195
-chr55068573950685739CGexonicISL1synonymous HNSC|1|512|0.00195
-chr55068552650685526CTexonicISL1synonymous SKCM|1|368|0.00272
rs754879931chr55068723350687233CTexonicISL1synonymous BRCA|1|982|0.00102
-chr55068350550683505GAexonicISL1nonsynonymous LUAD|4|543|0.00737
-chr55068574850685748GAexonicISL1synonymous UCEC|1|248|0.00403
-chr55068351850683518GTexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs768220738chr55068346750683467CTexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068576150685761AGexonicISL1nonsynonymous OV|1|469|0.00213
-chr55068046750680467GAexonicISL1nonsynonymous PAAD|1|185|0.00541
rs768556500chr55068943450689434TCexonicISL1nonsynonymous LUAD|2|543|0.00368
-chr55068553050685530CTexonicISL1stopgain KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr55068354650683546CTexonicISL1synonymous BLCA|1|396|0.00253
-chr55068571650685716CTexonicISL1stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068716450687164CAexonicISL1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068571750685717GAexonicISL1nonsynonymous BRCA|1|982|0.00102
-chr55068937150689371GTexonicISL1nonsynonymous ESCA|1|185|0.00541
-chr55068571250685712GCexonicISL1nonsynonymous BLCA|1|396|0.00253
rs777359230chr55068549350685493CTexonicISL1synonymous SKCM|1|368|0.00272
-chr55068550850685508CTexonicISL1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068569850685698CTexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068551350685513G-exonicISL1frameshift LUAD|1|543|0.00184
-chr55067951850679518GAexonicISL1nonsynonymous SKCM|2|368|0.00543
-chr55067952950679529A-exonicISL1frameshift STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068341150683411CTexonicISL1synonymous CESC|1|194|0.00515
-chr55068575850685758GCexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068333650683336CAexonicISL1synonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr55068573350685733GAexonicISL1synonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr55068334850683348GAexonicISL1synonymous DLBC|1|48|0.02083
-chr55068563150685631GTexonicISL1nonsynonymous BLCA|1|396|0.00253
-chr55068934450689344GAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068550750685507CTexonicISL1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068352150683521CAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068575150685751GTexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068054350680543AGexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068043750680437ATexonicISL1nonsynonymous SKCM|1|368|0.00272
-chr55068719850687198ACexonicISL1nonsynonymous SKCM|1|368|0.00272
rs762338816chr55068345750683457GAexonicISL1nonsynonymous UCEC|1|248|0.00403
-chr55068548550685485C-exonicISL1frameshift ACC|1|90|0.01111
-chr55068334050683340TAexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068724750687247ATexonicISL1nonsynonymous HNSC|1|512|0.00195
-chr55068939150689391TCexonicISL1nonsynonymous BRCA|1|982|0.00102
-chr55068352750683527TGexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068039050680390CAexonicISL1nonsynonymous UCEC|1|248|0.00403
-chr55068357250683572TAexonicISL1nonsynonymous LUAD|1|543|0.00184
-chr55068343850683438CAexonicISL1nonsynonymous LUSC|1|178|0.00562
-chr55068726250687262CTexonicISL1nonsynonymous BRCA|1|982|0.00102
-chr55068714450687144GTexonicISL1nonsynonymous HNSC|1|512|0.00195
-chr55068346850683468GAexonicISL1synonymous CESC|1|194|0.00515
-chr55068040850680408GAexonicISL1nonsynonymous KIPAN|2|799|0.00250,KIRC|2|451|0.00443
-chr55068052850680528GTexonicISL1nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr55068333550683335TAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068711950687119GAexonicISL1synonymous SKCM|1|368|0.00272
-chr55068563550685635GCexonicISL1nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr55068353850683538GAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068356550683565CAexonicISL1synonymous LUAD|2|543|0.00368
-chr55068563050685630TAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068562450685624CTexonicISL1nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr55068712750687127GAexonicISL1nonsynonymous SKCM|1|368|0.00272
rs777485181chr55068053550680535GAexonicISL1synonymous LUSC|1|178|0.00562
-chr55068346050683460GAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204,UCEC|1|248|0.00403
-chr55068552550685525ATexonicISL1nonsynonymous HNSC|1|512|0.00195
-chr55068556950685569GCexonicISL1nonsynonymous CESC|1|194|0.00515
-chr55068559850685598CTexonicISL1synonymous UCEC|1|248|0.00403
-chr55068335950683359GAexonicISL1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068935050689350CTexonicISL1nonsynonymous HNSC|1|512|0.00195
-chr55068723850687238TCexonicISL1nonsynonymous BLCA|1|396|0.00253
-chr55068565950685659CTexonicISL1nonsynonymous LUAD|2|543|0.00368
-chr55068349550683495ATexonicISL1synonymous LUSC|1|178|0.00562
-chr55068041050680410AGexonicISL1nonsynonymous KIPAN|1|799|0.00125,KIRP|1|282|0.00355
-chr55068354950683549TCexonicISL1synonymous LIHC|1|373|0.00268
-chr55068054250680542TAexonicISL1nonsynonymous LUAD|1|543|0.00184
rs121913540chr55068551450685514GAexonicISL1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068046250680462ACexonicISL1nonsynonymous ACC|1|90|0.01111
rs764011682chr55068552150685521GAexonicISL1nonsynonymous SKCM|1|368|0.00272
-chr55068713350687133CTexonicISL1nonsynonymous SKCM|1|368|0.00272
-chr55068556950685569GAexonicISL1nonsynonymous UCEC|1|248|0.00403
-chr55068566650685666CAexonicISL1nonsynonymous LIHC|1|373|0.00268
-chr55068576250685762ACexonicISL1nonsynonymous SKCM|1|368|0.00272
rs779219677chr55068050550680505CTexonicISL1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr55068555450685554CTexonicISL1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068336550683365GCexonicISL1nonsynonymous LUSC|1|178|0.00562
-chr55068556550685565GCexonicISL1synonymous BLCA|1|396|0.00253
-chr55068576450685764AGexonicISL1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr55068358450683584GTsplicingISL1splicing KIPAN|1|799|0.00125,KIRP|1|282|0.00355

Disease information of ISL1
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
ISL1 Bipolar Disorder F03 Mental or Behavioral Dysfunction PSYGENET
ISL1 Malignant neoplasm of urinary bladder C04;C12;C13 Neoplastic Process CTD_human
ISL1 Bladder Exstrophy C12;C13;C16 Disease or Syndrome ORPHANET
ISL1 Bladder Neoplasm C04;C12;C13 Neoplastic Process CTD_human
ISL1 Neoplasm Recurrence, Local C04;C23 Neoplastic Process CTD_human

Pathway associated with ISL1
pathway_ID pathway_name pathway_source gene_number edge_number
pathway0002182 Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) reactome 13 22
pathway0002747 Hs_Neural_Crest_Differentiation_WP2064_79263 wikipathways 40 129
pathway0002768 Hs_Heart_Development_WP1591_90186 wikipathways 28 78

Go term information of ISL1
GO_term_name GO_term_type TF_name
GO_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS BP ISL1
GO_OUTFLOW_TRACT_SEPTUM_MORPHOGENESIS BP ISL1
GO_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION BP ISL1
GO_POSITIVE_REGULATION_OF_INTERLEUKIN_1_BETA_PRODUCTION BP ISL1
GO_REGULATION_OF_INTERFERON_GAMMA_PRODUCTION BP ISL1
GO_ENDOCARDIAL_CUSHION_DEVELOPMENT BP ISL1
GO_REGULATION_OF_PROTEIN_HOMODIMERIZATION_ACTIVITY BP ISL1
GO_RETINAL_GANGLION_CELL_AXON_GUIDANCE BP ISL1
GO_NEGATIVE_REGULATION_OF_INTRACELLULAR_ESTROGEN_RECEPTOR_SIGNALING_PATHWAY BP ISL1
GO_REGULATION_OF_INTRACELLULAR_STEROID_HORMONE_RECEPTOR_SIGNALING_PATHWAY BP ISL1
GO_PITUITARY_GLAND_DEVELOPMENT BP ISL1
GO_RESPONSE_TO_AXON_INJURY BP ISL1
GO_POSITIVE_REGULATION_OF_STAT_CASCADE BP ISL1
GO_POSITIVE_REGULATION_OF_ORGANELLE_ORGANIZATION BP ISL1
GO_CRANIAL_NERVE_DEVELOPMENT BP ISL1
GO_ENDOCARDIAL_CUSHION_MORPHOGENESIS BP ISL1
GO_SPECIFICATION_OF_ORGAN_IDENTITY BP ISL1
GO_CELL_DIFFERENTIATION_IN_SPINAL_CORD BP ISL1
GO_AXON_REGENERATION BP ISL1
GO_POSITIVE_REGULATION_OF_DNA_BINDING BP ISL1
GO_REGULATION_OF_ORGAN_FORMATION BP ISL1
GO_SPINAL_CORD_MOTOR_NEURON_DIFFERENTIATION BP ISL1
GO_POSITIVE_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION BP ISL1
GO_CELL_MOTILITY BP ISL1
GO_VENTRAL_SPINAL_CORD_DEVELOPMENT BP ISL1
GO_EMBRYO_DEVELOPMENT BP ISL1
GO_ORGAN_FORMATION BP ISL1
GO_POSITIVE_REGULATION_OF_INSULIN_SECRETION BP ISL1
GO_REGULATION_OF_RESPONSE_TO_EXTERNAL_STIMULUS BP ISL1
GO_NEGATIVE_REGULATION_OF_PROTEIN_BINDING BP ISL1
GO_RESPONSE_TO_EXTERNAL_STIMULUS BP ISL1
GO_CARDIAC_ATRIUM_DEVELOPMENT BP ISL1
GO_ATRIAL_SEPTUM_DEVELOPMENT BP ISL1
GO_NEURAL_CREST_CELL_MIGRATION BP ISL1
GO_SPINAL_CORD_MOTOR_NEURON_CELL_FATE_SPECIFICATION BP ISL1
GO_NEGATIVE_REGULATION_OF_INTRACELLULAR_STEROID_HORMONE_RECEPTOR_SIGNALING_PATHWAY BP ISL1
GO_REGULATION_OF_INTERLEUKIN_1_BETA_PRODUCTION BP ISL1
GO_POSITIVE_REGULATION_OF_MOLECULAR_FUNCTION BP ISL1
GO_POSITIVE_REGULATION_OF_INTERLEUKIN_12_PRODUCTION BP ISL1
GO_VENTRICULAR_CARDIAC_MUSCLE_TISSUE_DEVELOPMENT BP ISL1
GO_ATRIAL_SEPTUM_MORPHOGENESIS BP ISL1
GO_REGULATION_OF_INTRACELLULAR_ESTROGEN_RECEPTOR_SIGNALING_PATHWAY BP ISL1
GO_CELLULAR_RESPONSE_TO_CORTICOSTEROID_STIMULUS BP ISL1
GO_REGULATION_OF_HEART_MORPHOGENESIS BP ISL1
GO_REGULATION_OF_PEPTIDYL_TYROSINE_PHOSPHORYLATION BP ISL1
GO_REGULATION_OF_PEPTIDE_TRANSPORT BP ISL1
GO_PERIPHERAL_NERVOUS_SYSTEM_NEURON_DIFFERENTIATION BP ISL1
GO_POSITIVE_REGULATION_OF_PROTEIN_SECRETION BP ISL1
GO_MYOBLAST_DIFFERENTIATION BP ISL1
GO_REGULATION_OF_HORMONE_SECRETION BP ISL1
GO_CARDIAC_VENTRICLE_MORPHOGENESIS BP ISL1
GO_NEURON_FATE_SPECIFICATION BP ISL1
GO_CARDIAC_RIGHT_VENTRICLE_MORPHOGENESIS BP ISL1
GO_REGULATION_OF_INTERLEUKIN_1_PRODUCTION BP ISL1
GO_CARDIAC_CELL_FATE_COMMITMENT BP ISL1
GO_POSITIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION BP ISL1
GO_CARDIAC_MUSCLE_TISSUE_MORPHOGENESIS BP ISL1
GO_CARDIOBLAST_DIFFERENTIATION BP ISL1
GO_NEGATIVE_REGULATION_OF_DEFENSE_RESPONSE BP ISL1
GO_HEART_FORMATION BP ISL1
GO_CARDIAC_VENTRICLE_DEVELOPMENT BP ISL1
GO_CELL_MORPHOGENESIS_INVOLVED_IN_DIFFERENTIATION BP ISL1
GO_POSITIVE_REGULATION_OF_CHROMATIN_MODIFICATION BP ISL1
GO_REGULATION_OF_GRANULOCYTE_MACROPHAGE_COLONY_STIMULATING_FACTOR_PRODUCTION BP ISL1
GO_CARDIAC_MUSCLE_TISSUE_DEVELOPMENT BP ISL1
GO_POSITIVE_REGULATION_OF_TYROSINE_PHOSPHORYLATION_OF_STAT3_PROTEIN BP ISL1
GO_REGULATION_OF_VASCULAR_ENDOTHELIAL_GROWTH_FACTOR_PRODUCTION BP ISL1
GO_CELL_FATE_DETERMINATION BP ISL1
GO_NEURON_PROJECTION_REGENERATION BP ISL1
GO_POSITIVE_REGULATION_OF_PEPTIDYL_TYROSINE_PHOSPHORYLATION BP ISL1
GO_POSITIVE_REGULATION_OF_PROTEIN_ACETYLATION BP ISL1
GO_REGULATION_OF_CELL_PROLIFERATION_INVOLVED_IN_HEART_MORPHOGENESIS BP ISL1
GO_PHARYNGEAL_SYSTEM_DEVELOPMENT BP ISL1
GO_POSITIVE_REGULATION_OF_PEPTIDE_SECRETION BP ISL1
GO_REGULATION_OF_CHROMOSOME_ORGANIZATION BP ISL1
GO_CELL_PROJECTION_ORGANIZATION BP ISL1
GO_STEM_CELL_DIFFERENTIATION BP ISL1
GO_REGULATION_OF_TYROSINE_PHOSPHORYLATION_OF_STAT3_PROTEIN BP ISL1
GO_OUTFLOW_TRACT_MORPHOGENESIS BP ISL1
GO_POSITIVE_REGULATION_OF_TRANSPORT BP ISL1
GO_PERIPHERAL_NERVOUS_SYSTEM_DEVELOPMENT BP ISL1
GO_CARDIAC_SEPTUM_MORPHOGENESIS BP ISL1
GO_REGULATION_OF_INTERLEUKIN_6_PRODUCTION BP ISL1
GO_MESENCHYME_MORPHOGENESIS BP ISL1
GO_POSITIVE_REGULATION_OF_INTERFERON_GAMMA_PRODUCTION BP ISL1
GO_POSITIVE_REGULATION_OF_INTERLEUKIN_6_PRODUCTION BP ISL1
GO_CIRCULATORY_SYSTEM_DEVELOPMENT BP ISL1
GO_INNERVATION BP ISL1
GO_TISSUE_DEVELOPMENT BP ISL1
GO_POSITIVE_REGULATION_OF_VASCULAR_ENDOTHELIAL_GROWTH_FACTOR_PRODUCTION BP ISL1
GO_REGULATION_OF_INTERLEUKIN_12_PRODUCTION BP ISL1
GO_REGULATION_OF_VASCULATURE_DEVELOPMENT BP ISL1
GO_BHLH_TRANSCRIPTION_FACTOR_BINDING MF ISL1
GO_ENHANCER_BINDING MF ISL1
GO_ESTROGEN_RECEPTOR_BINDING MF ISL1
GO_REGULATORY_REGION_NUCLEIC_ACID_BINDING MF ISL1
GO_TRANSCRIPTIONAL_REPRESSOR_ACTIVITY_RNA_POLYMERASE_II_ACTIVATING_TRANSCRIPTION_FACTOR_BINDING MF ISL1
GO_LIGAND_DEPENDENT_NUCLEAR_RECEPTOR_BINDING MF ISL1
GO_TRANSCRIPTIONAL_REPRESSOR_ACTIVITY_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_BINDING MF ISL1
GO_STEROID_HORMONE_RECEPTOR_BINDING MF ISL1
GO_RNA_POLYMERASE_II_ACTIVATING_TRANSCRIPTION_FACTOR_BINDING MF ISL1
GO_RNA_POLYMERASE_II_TRANSCRIPTION_COACTIVATOR_ACTIVITY MF ISL1
GO_RNA_POLYMERASE_II_TRANSCRIPTION_COFACTOR_ACTIVITY MF ISL1
GO_RECEPTOR_BINDING MF ISL1

Survival analysis of ISL1



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of ISL1