Sample ID: | Sample_02_318 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | NB69 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 128 |
TF number of all CRCs: | 29 |
TF list of all CRCs: | RARA, HOXD9, HOXD10, HOXD11, PHOX2B, TBX2, PHOX2A, GATA3, POU2F2, KLF7, MEIS1, HOXD8, ESRRG, TEAD1, FOSL2, JUNB, MYC, ISL1, TCF4, E2F2, MEIS2, MAZ, LBX2, TLX2, SATB1, GATA2, ZNF423, SIX3, NFIB |
TF name | TF family | Frequency of TFs |
---|---|---|
GATA3 | zf-GATA | 70 / 128 |
HOXD10 | Homeobox | 95 / 128 |
HOXD11 | Homeobox | 95 / 128 |
HOXD8 | Homeobox | 58 / 128 |
HOXD9 | Homeobox | 121 / 128 |
KLF7 | zf-C2H2 | 63 / 128 |
MEIS1 | Homeobox | 59 / 128 |
MYC | bHLH | 39 / 128 |
PHOX2A | Homeobox | 74 / 128 |
PHOX2B | Homeobox | 93 / 128 |
POU2F2 | Pou | 70 / 128 |
RARA | THR-like | 127 / 128 |
TBX2 | T-box | 85 / 128 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
RARA | 127 / 128 | THR-like | ENSG00000131759 |
HOXD9 | 121 / 128 | Homeobox | ENSG00000128709 |
HOXD10 | 95 / 128 | Homeobox | ENSG00000128710 |
HOXD11 | 95 / 128 | Homeobox | ENSG00000128713 |
PHOX2B | 93 / 128 | Homeobox | ENSG00000109132 |
TBX2 | 85 / 128 | T-box | ENSG00000121068 |
PHOX2A | 74 / 128 | Homeobox | ENSG00000165462 |
POU2F2 | 70 / 128 | Pou | ENSG00000028277 |
GATA3 | 70 / 128 | zf-GATA | ENSG00000107485 |
KLF7 | 63 / 128 | zf-C2H2 | ENSG00000118263 |
MEIS1 | 59 / 128 | Homeobox | ENSG00000143995 |
ESRRG | 58 / 128 | ESR-like | ENSG00000196482 |
HOXD8 | 58 / 128 | Homeobox | ENSG00000175879 |
TEAD1 | 46 / 128 | TEA | ENSG00000187079 |
FOSL2 | 42 / 128 | TF_bZIP | ENSG00000075426 |
JUNB | 41 / 128 | TF_bZIP | ENSG00000171223 |
ISL1 | 39 / 128 | Homeobox | ENSG00000016082 |
MYC | 39 / 128 | bHLH | ENSG00000136997 |
TCF4 | 36 / 128 | bHLH | ENSG00000196628 |
E2F2 | 34 / 128 | E2F | ENSG00000007968 |
MEIS2 | 32 / 128 | Homeobox | ENSG00000134138 |
MAZ | 31 / 128 | zf-C2H2 | ENSG00000103495 |
TLX2 | 26 / 128 | Homeobox | ENSG00000115297 |
LBX2 | 26 / 128 | Homeobox | ENSG00000179528 |
SATB1 | 23 / 128 | CUT | ENSG00000182568 |
GATA2 | 21 / 128 | zf-GATA | ENSG00000179348 |
ZNF423 | 8 / 128 | zf-C2H2 | ENSG00000102935 |
SIX3 | 6 / 128 | Homeobox | ENSG00000138083 |
NFIB | 1 / 128 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ISL1 | 34 | 39 | 73 |
JUNB | 35 | 41 | 76 |
TBX2 | 30 | 47 | 77 |
TLX2 | 23 | 49 | 72 |
TEAD1 | 32 | 43 | 75 |
RARA | 35 | 50 | 85 |
MEIS2 | 30 | 47 | 77 |
MEIS1 | 30 | 48 | 78 |
KLF7 | 32 | 46 | 78 |
FOSL2 | 29 | 42 | 71 |
MYC | 28 | 45 | 73 |
TCF4 | 35 | 43 | 78 |
ESRRG | 28 | 48 | 76 |
HOXD8 | 33 | 42 | 75 |
HOXD9 | 33 | 48 | 81 |
LBX2 | 23 | 43 | 66 |
SATB1 | 29 | 44 | 73 |
PHOX2B | 35 | 44 | 79 |
GATA2 | 33 | 40 | 73 |
GATA3 | 33 | 47 | 80 |
SIX3 | 29 | 24 | 53 |
NFIB | 6 | 29 | 35 |
PHOX2A | 33 | 45 | 78 |
E2F2 | 28 | 42 | 70 |
MAZ | 27 | 51 | 78 |
HOXD10 | 33 | 46 | 79 |
HOXD11 | 33 | 45 | 78 |
ZNF423 | 30 | 30 | 60 |
POU2F2 | 32 | 48 | 80 |