TF information

TF name: SATB1
TF family: CUT
Ensembl gene ID: ENSG00000182568
Ensembl protein ID: ENSP00000399518, ENSP00000341024, ENSP00000399708
Entrez gene ID: 6304
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of SATB1 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_021Cell lineColonV4290.015566445661574
Sample_02_254Cell lineNeuroblastomaIMR5-750.29411764705882
Sample_02_296Cell lineNeuroblastomaCLB-BER-Lud0.12471308339709
Sample_02_298Cell lineNeuroblastomaCLB-GA0.095890410958904
Sample_02_299Cell lineNeuroblastomaCLB-MA0.33093525179856
Sample_02_302Cell lineNeuroblastomaIMR320.17857142857143
Sample_02_303Cell lineNeuroblastomaLAN10.22857142857143
Sample_02_310Cell lineNeuroblastomaSJNB80.036697247706422
Sample_02_313Cell lineNeuroblastomaSK-N-DZ0.096525096525097
Sample_02_318Cell lineNeuroblastomaNB690.1796875
Sample_02_403Cell lineMammary GlandT-47D_untreat0.19318181818182

SATB1 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name

SATB1 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with SATB1
Download

Mutation of SATB1
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of SATB1

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr31839107818391078GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31845849318458493CAexonicSATB1stopgain UCEC|1|248|0.00403
rs376013841chr31839081218390812GAexonicSATB1synonymous UCEC|1|248|0.00403
-chr31839362018393620TCexonicSATB1nonsynonymous LIHC|1|373|0.00268,STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845851718458517ACexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31839067118390671CTexonicSATB1synonymous SKCM|1|368|0.00272
-chr31839359818393598GAexonicSATB1synonymous UCEC|1|248|0.00403
-chr31839097018390970ACexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31841972318419723TCexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31845750818457508TAexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31841968318419683CAexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31839108218391082GAexonicSATB1synonymous UCEC|1|248|0.00403
-chr31841967718419677TGexonicSATB1synonymous LUAD|1|543|0.00184
-chr31846235918462359TGexonicSATB1nonsynonymous PAAD|1|185|0.00541
-chr31843638518436385GAexonicSATB1synonymous BLCA|1|396|0.00253
-chr31843608918436089CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31843615618436156CAexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31842792018427920TGexonicSATB1nonsynonymous LUSC|1|178|0.00562
-chr31845854618458546AGexonicSATB1nonsynonymous LUAD|1|543|0.00184
rs548597280chr31843604018436040CTexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31839094018390940CTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31842789118427891CTexonicSATB1synonymous SKCM|1|368|0.00272
rs564141224chr31839354518393545GAexonicSATB1nonsynonymous BLCA|1|396|0.00253,HNSC|1|512|0.00195
-chr31846230318462303GAexonicSATB1stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31845669018456690CTexonicSATB1stopgain STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845671318456713CGexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31845849318458493CTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839362818393628CAexonicSATB1synonymous LUAD|1|543|0.00184
-chr31839090718390907CAexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31842805218428052GAexonicSATB1stopgain GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr31843610518436105GAexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31843868018438680CAexonicSATB1nonsynonymous COADREAD|1|489|0.00204,READ|1|122|0.00820,UCS|1|57|0.01754
-chr31845758218457582GAexonicSATB1synonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr31842797118427971CTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845756718457567AGexonicSATB1synonymous LUSC|1|178|0.00562
-chr31842790118427901CTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs755807693chr31843630318436303GAexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31843596118435961CAexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31843636218436362AGexonicSATB1synonymous LUAD|1|543|0.00184
-chr31839066618390666TCexonicSATB1nonsynonymous LIHC|1|373|0.00268
-chr31843624618436246GTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845666118456661TGexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845839218458392AGsplicingSATB1splicing STAD|1|395|0.00253,STES|1|395|0.00253
rs752755275chr31839103018391030GAexonicSATB1stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253
-chr31842790918427909TGexonicSATB1synonymous BRCA|1|982|0.00102
-chr31845668418456684GAexonicSATB1synonymous PAAD|1|185|0.00541
-chr31839080218390802CGexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31842799318427993T-exonicSATB1frameshift LUAD|1|543|0.00184
-chr31839112918391129GAexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31843597118435971CAexonicSATB1nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
rs147456964chr31839352018393520CTexonicSATB1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs773710485chr31846227118462271CTexonicSATB1synonymous BLCA|1|396|0.00253
rs751519264chr31843627018436270CTexonicSATB1nonsynonymous ESCA|1|185|0.00541
-chr31842792518427925GTexonicSATB1nonsynonymous LIHC|1|373|0.00268
-chr31839287818392878CTexonicSATB1nonsynonymous SARC|1|247|0.00405
rs138373358chr31846228018462280CTexonicSATB1synonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr31839100818391008GCexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31846235318462353TCexonicSATB1nonsynonymous PAAD|1|185|0.00541
-chr31843619918436199GTexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31841972418419724CAexonicSATB1stopgain COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31839354918393549TCexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31841977718419777GTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31843602318436023TCexonicSATB1synonymous BRCA|1|982|0.00102
-chr31839081118390811CTexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31839366418393664GAexonicSATB1synonymous SKCM|1|368|0.00272
-chr31839098518390985CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
rs375291674chr31839084518390845GAexonicSATB1synonymous UCEC|1|248|0.00403
-chr31845755118457551CGexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839069718390697CAexonicSATB1stopgain STAD|1|395|0.00253,STES|1|395|0.00253
-chr31843627618436276GAexonicSATB1nonsynonymous LUSC|1|178|0.00562
-chr31842795418427954CTexonicSATB1synonymous BLCA|1|396|0.00253
rs754107664chr31839114518391145CTexonicSATB1synonymous BLCA|1|396|0.00253
-chr31843877218438772GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31845844118458441GAexonicSATB1nonsynonymous LIHC|1|373|0.00268
-chr31839114118391160GCTGCTGCTGCTGTTGCTGT-exonicSATB1frameshift PCPG|1|184|0.00543
-chr31845762018457620TAexonicSATB1nonsynonymous SARC|1|247|0.00405
-chr31839076618390766CTexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31843867418438674TCexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31846239618462396CTexonicSATB1nonsynonymous SKCM|2|368|0.00543
-chr31845670318456703GAexonicSATB1nonsynonymous SKCM|2|368|0.00543
rs61733671chr31845669318456693TCexonicSATB1synonymous LIHC|1|373|0.00268
-chr31839073018390730A-exonicSATB1frameshift STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839364218393642CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31839096418390964GAexonicSATB1stopgain SARC|1|247|0.00405
-chr31839102518391025CTexonicSATB1synonymous SKCM|1|368|0.00272
-chr31839109018391090GTexonicSATB1nonsynonymous HNSC|1|512|0.00195
-chr31839094218390942TGexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31845757218457572CAexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31843600618436006CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
rs769372550chr31839106418391064CTexonicSATB1synonymous STAD|2|395|0.00506,STES|2|395|0.00506
-chr31843600718436007GAexonicSATB1stopgain UCEC|1|248|0.00403
-chr31839357618393576GAexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839354818393548TCexonicSATB1nonsynonymous COAD|3|367|0.00817,COADREAD|3|489|0.00613
-chr31842809418428094A-exonicSATB1frameshift SKCM|1|368|0.00272
-chr31846233518462335CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31843598418435984TCexonicSATB1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs764362388chr31843635918436359GCexonicSATB1synonymous OV|1|469|0.00213
-chr31839367818393678ACexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31841972218419722TCexonicSATB1synonymous COAD|2|367|0.00545,COADREAD|3|489|0.00613,READ|1|122|0.00820
-chr31846247818462478GCUTR5SATB1unknown HNSC|1|512|0.00195
-chr31842795418427954CAexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31843615318436153ACexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31843622718436227ATexonicSATB1synonymous LIHC|1|373|0.00268
-chr31846239718462397AGexonicSATB1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31843617018436180CTGCTGGTTCA-exonicSATB1frameshift LUAD|1|543|0.00184
-chr31845750218457502TCexonicSATB1nonsynonymous BLCA|1|396|0.00253
-chr31845841418458414CTexonicSATB1nonsynonymous TGCT|1|155|0.00645
-chr31839363018393630GAexonicSATB1synonymous SKCM|1|368|0.00272
-chr31839368618393686CGexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31839350818393508GAexonicSATB1synonymous SKCM|1|368|0.00272
-chr31839099418390994CTexonicSATB1nonsynonymous OV|1|469|0.00213
-chr31846237518462375TGexonicSATB1nonsynonymous LIHC|1|373|0.00268
-chr31843876918438769GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31839097618390976GTexonicSATB1nonsynonymous LUAD|1|543|0.00184
rs777236078chr31839106518391065GAexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839076918390769CTexonicSATB1nonsynonymous BLCA|2|396|0.00505
-chr31839068818390688CAexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31843868018438680CGexonicSATB1nonsynonymous BLCA|1|396|0.00253
-chr31843621718436217GTexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31839073518390735ATexonicSATB1nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr31839114818391148CTexonicSATB1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs865844797chr31839101118391011CTexonicSATB1nonsynonymous SKCM|2|368|0.00543
-chr31845753218457532TCexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31845757518457575CTexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31839087218390872CTexonicSATB1synonymous OV|1|469|0.00213
-chr31843876118438761TCexonicSATB1nonsynonymous LIHC|1|373|0.00268
rs116044839chr31839281918392819CTexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31842808118428081CTexonicSATB1nonsynonymous OV|1|469|0.00213,STAD|1|395|0.00253,STES|1|395|0.00253
rs749399861chr31839076418390764CTexonicSATB1synonymous BLCA|2|396|0.00505
-chr31843633318436333CTexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31841979318419793CAexonicSATB1stopgain PAAD|1|185|0.00541
-chr31843616118436161CTexonicSATB1synonymous SKCM|1|368|0.00272
-chr31843636618436366TCexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31845839418458394CTexonicSATB1nonsynonymous HNSC|1|512|0.00195
rs776065234chr31839094118390941GAexonicSATB1synonymous SKCM|1|368|0.00272
-chr31843621118436211CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31845846518458465ATexonicSATB1nonsynonymous BRCA|1|982|0.00102
-chr31839354418393544CGexonicSATB1synonymous LUSC|1|178|0.00562
-chr31845758518457585ACexonicSATB1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31839350118393501GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31843599318435993GTexonicSATB1synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31843627618436276GCexonicSATB1nonsynonymous LUSC|1|178|0.00562
-chr31845852618458526CTexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31845661118456611G-exonicSATB1frameshift STAD|1|395|0.00253,STES|1|395|0.00253
-chr31845665918456659CTexonicSATB1nonsynonymous BLCA|1|396|0.00253
-chr31843871918438719CAexonicSATB1stopgain UCEC|1|248|0.00403
-chr31839116918391169CTexonicSATB1synonymous OV|1|469|0.00213
-chr31839086818390868GTexonicSATB1nonsynonymous LUAD|1|543|0.00184
-chr31839361018393610CTexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31842792218427922-GexonicSATB1frameshift KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr31839113418391135TG-exonicSATB1frameshift CHOL|1|35|0.02857,PAAD|6|185|0.03243,THCA|1|504|0.00198
-chr31841976618419766TCexonicSATB1nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr31839102318391023TGexonicSATB1nonsynonymous SKCM|1|368|0.00272
rs776281718chr31839082318390823CTexonicSATB1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr31846236618462366GAexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31839085618390856GCexonicSATB1nonsynonymous HNSC|1|512|0.00195
-chr31841981018419810GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
-chr31839071018390710CGexonicSATB1nonsynonymous LUSC|1|178|0.00562
-chr31839350718393507GAexonicSATB1nonsynonymous SKCM|1|368|0.00272
rs201064692chr31843630218436302CTexonicSATB1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31839106718391067GAexonicSATB1synonymous SKCM|2|368|0.00543
-chr31839113218391132-TGexonicSATB1frameshift UCEC|1|248|0.00403
-chr31839111218391112TCexonicSATB1synonymous UCEC|1|248|0.00403
-chr31842804818428048GTexonicSATB1nonsynonymous UCEC|1|248|0.00403
rs199813083chr31845848418458484GAexonicSATB1synonymous SKCM|2|368|0.00543
-chr31839093618390936TCexonicSATB1nonsynonymous KIPAN|1|799|0.00125,KIRP|1|282|0.00355
-chr31845759618457596CAexonicSATB1nonsynonymous PAAD|1|185|0.00541
-chr31846234618462346GAexonicSATB1synonymous SKCM|1|368|0.00272
rs752846934chr31843623918436239GAexonicSATB1synonymous SKCM|3|368|0.00815
-chr31842798618427986GAexonicSATB1stopgain UCEC|1|248|0.00403
-chr31842791818427918GCexonicSATB1nonsynonymous CESC|1|194|0.00515
-chr31839113718391137TCexonicSATB1nonsynonymous UCEC|1|248|0.00403
-chr31843606218436062CTexonicSATB1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204,UCEC|1|248|0.00403
-chr31839081518390815CGexonicSATB1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31846245918462459TCexonicSATB1nonsynonymous PRAD|1|499|0.00200
-chr31839107718391077G-exonicSATB1frameshift COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253
-chr31843627518436275ACexonicSATB1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr31839108718391087GAexonicSATB1nonsynonymous BLCA|1|396|0.00253,HNSC|1|512|0.00195

Disease information of SATB1
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
SATB1 Adenocarcinoma of lung (disorder) C04;C08 Neoplastic Process CTD_human

Pathway associated with SATB1
pathway_ID pathway_name pathway_source gene_number edge_number
pathway0000198 Apoptotic cleavage of cellular proteins reactome 18 40
pathway0000377 Caspase Cascade in Apoptosis pid 57 396

Go term information of SATB1
GO_term_name GO_term_type TF_name
GO_ALPHA_BETA_T_CELL_DIFFERENTIATION BP SATB1
GO_T_CELL_PROLIFERATION BP SATB1
GO_REFLEX BP SATB1
GO_CELL_CELL_ADHESION BP SATB1
GO_CD4_POSITIVE_ALPHA_BETA_T_CELL_ACTIVATION BP SATB1
GO_CELLULAR_COMPONENT_DISASSEMBLY_INVOLVED_IN_EXECUTION_PHASE_OF_APOPTOSIS BP SATB1
GO_CHROMATIN CC SATB1
GO_NUCLEAR_HETEROCHROMATIN CC SATB1
GO_HETEROCHROMATIN CC SATB1
GO_NUCLEAR_MATRIX CC SATB1
GO_NUCLEAR_PERIPHERY CC SATB1

Survival analysis of SATB1



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of SATB1