Sample ID: | Sample_02_310 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | SJNB8 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 1526 |
TF number of all CRCs: | 50 |
TF list of all CRCs: | RARA, TFAP2B, MEIS1, TBX2, PHOX2B, SP1, KLF7, SMAD3, TEAD1, MAZ, MEIS2, GATA3, PBX1, JUNB, JUND, KLF16, EBF1, TLX2, DLX2, PHOX2A, TCF12, SOX4, RFX3, RFX7, MEF2D, NFE2L2, ZNF219, ZBTB7B, TCF4, NR6A1, ERF, RFX5, NEUROD1, ISL1, SOX12, NFYA, NR2F1, ZNF423, ETV4, ZNF217, ETV1, SATB1, HMBOX1, SOX2, PROX1, NFE2L1, CREB3L2, HLX, NHLH1, NFIB |
TF name | TF family | Frequency of TFs |
---|---|---|
DLX2 | Homeobox | 377 / 1526 |
KLF7 | zf-C2H2 | 650 / 1526 |
MAZ | zf-C2H2 | 616 / 1526 |
MEIS1 | Homeobox | 890 / 1526 |
MEIS2 | Homeobox | 573 / 1526 |
PBX1 | Homeobox | 542 / 1526 |
PHOX2B | Homeobox | 674 / 1526 |
RARA | THR-like | 1487 / 1526 |
SMAD3 | MH1 | 633 / 1526 |
SP1 | zf-C2H2 | 669 / 1526 |
TBX2 | T-box | 729 / 1526 |
TEAD1 | TEA | 630 / 1526 |
TFAP2B | AP-2 | 1095 / 1526 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
RARA | 1487 / 1526 | THR-like | ENSG00000131759 |
TFAP2B | 1095 / 1526 | AP-2 | ENSG00000008196 |
MEIS1 | 890 / 1526 | Homeobox | ENSG00000143995 |
TBX2 | 729 / 1526 | T-box | ENSG00000121068 |
PHOX2B | 674 / 1526 | Homeobox | ENSG00000109132 |
SP1 | 669 / 1526 | zf-C2H2 | ENSG00000185591 |
KLF7 | 650 / 1526 | zf-C2H2 | ENSG00000118263 |
SMAD3 | 633 / 1526 | MH1 | ENSG00000166949 |
TEAD1 | 630 / 1526 | TEA | ENSG00000187079 |
MAZ | 616 / 1526 | zf-C2H2 | ENSG00000103495 |
MEIS2 | 573 / 1526 | Homeobox | ENSG00000134138 |
GATA3 | 571 / 1526 | zf-GATA | ENSG00000107485 |
PBX1 | 542 / 1526 | Homeobox | ENSG00000185630 |
JUNB | 524 / 1526 | TF_bZIP | ENSG00000171223 |
JUND | 522 / 1526 | TF_bZIP | ENSG00000130522 |
KLF16 | 435 / 1526 | zf-C2H2 | ENSG00000129911 |
EBF1 | 413 / 1526 | COE | ENSG00000164330 |
TLX2 | 387 / 1526 | Homeobox | ENSG00000115297 |
DLX2 | 377 / 1526 | Homeobox | ENSG00000115844 |
PHOX2A | 363 / 1526 | Homeobox | ENSG00000165462 |
TCF12 | 297 / 1526 | bHLH | ENSG00000140262 |
SOX4 | 269 / 1526 | HMG | ENSG00000124766 |
RFX3 | 267 / 1526 | RFX | ENSG00000080298 |
RFX7 | 221 / 1526 | RFX | ENSG00000181827 |
MEF2D | 214 / 1526 | SRF | ENSG00000116604 |
NFE2L2 | 214 / 1526 | TF_bZIP | ENSG00000116044 |
ZNF219 | 209 / 1526 | zf-C2H2 | ENSG00000165804 |
ZBTB7B | 208 / 1526 | ZBTB | ENSG00000160685 |
TCF4 | 188 / 1526 | bHLH | ENSG00000196628 |
NR6A1 | 162 / 1526 | GCNF-like | ENSG00000148200 |
ERF | 161 / 1526 | ETS | ENSG00000105722 |
RFX5 | 140 / 1526 | RFX | ENSG00000143390 |
NEUROD1 | 126 / 1526 | bHLH | ENSG00000162992 |
ISL1 | 100 / 1526 | Homeobox | ENSG00000016082 |
SOX12 | 98 / 1526 | HMG | ENSG00000177732 |
NFYA | 96 / 1526 | NF-YA | ENSG00000001167 |
NR2F1 | 85 / 1526 | RXR-like | ENSG00000175745 |
ZNF423 | 74 / 1526 | zf-C2H2 | ENSG00000102935 |
ETV4 | 69 / 1526 | ETS | ENSG00000175832 |
ZNF217 | 68 / 1526 | zf-C2H2 | ENSG00000171940 |
ETV1 | 60 / 1526 | NA | NA |
SATB1 | 56 / 1526 | CUT | ENSG00000182568 |
HMBOX1 | 47 / 1526 | Homeobox | ENSG00000147421 |
SOX2 | 40 / 1526 | HMG | ENSG00000181449 |
PROX1 | 30 / 1526 | HPD | ENSG00000117707 |
NFE2L1 | 23 / 1526 | TF_bZIP | ENSG00000082641 |
CREB3L2 | 17 / 1526 | TF_bZIP | ENSG00000182158 |
HLX | 8 / 1526 | Homeobox | ENSG00000136630 |
NHLH1 | 6 / 1526 | bHLH | ENSG00000171786 |
NFIB | 1 / 1526 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ZNF217 | 48 | 39 | 87 |
TCF4 | 59 | 52 | 111 |
PHOX2B | 60 | 61 | 121 |
ISL1 | 50 | 47 | 97 |
JUNB | 60 | 58 | 118 |
ZNF219 | 42 | 71 | 113 |
JUND | 51 | 71 | 122 |
SMAD3 | 48 | 76 | 124 |
TBX2 | 53 | 61 | 114 |
NFYA | 39 | 62 | 101 |
MAZ | 50 | 79 | 129 |
SOX2 | 24 | 78 | 102 |
TEAD1 | 55 | 69 | 124 |
MEF2D | 52 | 61 | 113 |
SOX4 | 42 | 75 | 117 |
RARA | 59 | 79 | 138 |
KLF16 | 51 | 72 | 123 |
HMBOX1 | 35 | 59 | 94 |
SOX12 | 40 | 75 | 115 |
TFAP2B | 55 | 68 | 123 |
NR2F1 | 37 | 66 | 103 |
MEIS2 | 53 | 64 | 117 |
MEIS1 | 57 | 69 | 126 |
GATA3 | 58 | 70 | 128 |
KLF7 | 51 | 69 | 120 |
ERF | 58 | 43 | 101 |
ZNF423 | 55 | 36 | 91 |
ZBTB7B | 47 | 61 | 108 |
SP1 | 49 | 79 | 128 |
TCF12 | 43 | 70 | 113 |
NR6A1 | 33 | 66 | 99 |
SATB1 | 42 | 63 | 105 |
PHOX2A | 56 | 63 | 119 |
PROX1 | 53 | 32 | 85 |
PBX1 | 50 | 70 | 120 |
ETV1 | 44 | 38 | 82 |
NFIB | 16 | 40 | 56 |
NEUROD1 | 31 | 62 | 93 |
ETV4 | 32 | 63 | 95 |
HLX | 20 | 58 | 78 |
RFX5 | 41 | 60 | 101 |
RFX7 | 42 | 60 | 102 |
TLX2 | 46 | 72 | 118 |
RFX3 | 44 | 65 | 109 |
CREB3L2 | 38 | 38 | 76 |
NHLH1 | 14 | 66 | 80 |
DLX2 | 56 | 57 | 113 |
NFE2L2 | 43 | 64 | 107 |
EBF1 | 46 | 66 | 112 |
NFE2L1 | 45 | 39 | 84 |