TF name: | HMBOX1 |
TF family: | Homeobox |
Ensembl gene ID: | ENSG00000147421 |
Ensembl protein ID: | ENSP00000380516, ENSP00000475196, ENSP00000287701, ENSP00000453185, ENSP00000430059, ENSP00000453211, ENSP00000452827, ENSP00000430110 |
Entrez gene ID: | 79618 |
Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_310 | Cell line | Neuroblastoma | SJNB8 | 0.030799475753604 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr8 | 28876383 | 28876383 | A | G | exonic | HMBOX1 | synonymous | COAD|2|367|0.00545,COADREAD|2|489|0.00409 |
- | chr8 | 28904937 | 28904937 | A | G | exonic | HMBOX1 | nonsynonymous | LIHC|1|373|0.00268 |
rs372681580 | chr8 | 28876278 | 28876278 | C | T | exonic | HMBOX1 | synonymous | STAD|2|395|0.00506,STES|2|395|0.00506 |
- | chr8 | 28906831 | 28906832 | GA | - | intronic | HMBOX1 | unknown | ESCA|1|185|0.00541 |
- | chr8 | 28906499 | 28906499 | A | T | exonic | HMBOX1 | synonymous | HNSC|1|512|0.00195 |
- | chr8 | 28904886 | 28904886 | T | C | exonic | HMBOX1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr8 | 28821327 | 28821327 | G | C | splicing | HMBOX1 | splicing | BRCA|1|982|0.00102 |
- | chr8 | 28906844 | 28906844 | G | A | intronic | HMBOX1 | unknown | SARC|1|247|0.00405 |
- | chr8 | 28827984 | 28827984 | G | A | exonic | HMBOX1 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr8 | 28827975 | 28827975 | T | C | exonic | HMBOX1 | nonsynonymous | BLCA|2|396|0.00505 |
- | chr8 | 28837591 | 28837591 | G | C | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr8 | 28837639 | 28837639 | G | A | exonic | HMBOX1 | synonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr8 | 28902934 | 28902934 | C | T | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272 |
rs561779767 | chr8 | 28827636 | 28827636 | C | T | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
rs766493916 | chr8 | 28906544 | 28906544 | C | T | exonic | HMBOX1 | synonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr8 | 28876382 | 28876382 | G | A | exonic | HMBOX1 | nonsynonymous | COAD|2|367|0.00545,COADREAD|2|489|0.00409 |
- | chr8 | 28827600 | 28827600 | T | G | exonic | HMBOX1 | nonsynonymous | BRCA|1|982|0.00102 |
- | chr8 | 28876381 | 28876381 | C | G | exonic | HMBOX1 | nonsynonymous | OV|1|469|0.00213 |
- | chr8 | 28876391 | 28876391 | G | A | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr8 | 28904909 | 28904909 | C | T | exonic | HMBOX1 | synonymous | HNSC|1|512|0.00195 |
rs763363239 | chr8 | 28827942 | 28827942 | C | T | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr8 | 28827926 | 28827926 | A | G | exonic | HMBOX1 | synonymous | LUSC|1|178|0.00562 |
- | chr8 | 28876343 | 28876343 | C | T | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272,UCEC|1|248|0.00403 |
- | chr8 | 28908596 | 28908596 | C | T | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr8 | 28827628 | 28827628 | A | T | exonic | HMBOX1 | nonsynonymous | LUAD|2|543|0.00368 |
- | chr8 | 28876303 | 28876303 | C | T | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr8 | 28909078 | 28909086 | GATGCAAGC | - | UTR3 | HMBOX1 | unknown | SARC|1|247|0.00405 |
rs201114085 | chr8 | 28906577 | 28906577 | C | T | intronic | HMBOX1 | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28902932 | 28902932 | C | G | exonic | HMBOX1 | nonsynonymous | BLCA|1|396|0.00253 |
rs528996837 | chr8 | 28827640 | 28827640 | G | A | exonic | HMBOX1 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28827803 | 28827803 | C | T | exonic | HMBOX1 | synonymous | KIPAN|1|799|0.00125,KIRC|1|451|0.00222 |
rs777042809 | chr8 | 28827691 | 28827691 | G | A | exonic | HMBOX1 | nonsynonymous | ESCA|1|185|0.00541 |
rs768863859 | chr8 | 28906493 | 28906493 | T | C | exonic | HMBOX1 | synonymous | UCEC|1|248|0.00403 |
rs764079365 | chr8 | 28876293 | 28876293 | G | A | exonic | HMBOX1 | nonsynonymous | CESC|1|194|0.00515,HNSC|1|512|0.00195 |
- | chr8 | 28827755 | 28827755 | G | T | exonic | HMBOX1 | synonymous | BLCA|1|396|0.00253 |
- | chr8 | 28827928 | 28827928 | A | T | exonic | HMBOX1 | nonsynonymous | DLBC|1|48|0.02083 |
rs372399969 | chr8 | 28902933 | 28902933 | G | A | exonic | HMBOX1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28827631 | 28827631 | G | A | exonic | HMBOX1 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr8 | 28876350 | 28876350 | C | G | exonic | HMBOX1 | synonymous | BLCA|1|396|0.00253 |
- | chr8 | 28906561 | 28906561 | A | G | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr8 | 28902895 | 28902895 | A | G | exonic | HMBOX1 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28876337 | 28876337 | C | T | exonic | HMBOX1 | nonsynonymous | STAD|2|395|0.00506,STES|2|395|0.00506 |
- | chr8 | 28908612 | 28908612 | C | A | exonic | HMBOX1 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28827693 | 28827693 | C | G | exonic | HMBOX1 | nonsynonymous | LUSC|1|178|0.00562 |
- | chr8 | 28908583 | 28908583 | G | A | exonic | HMBOX1 | nonsynonymous | SARC|1|247|0.00405 |
- | chr8 | 28876412 | 28876412 | G | A | exonic | HMBOX1 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28866603 | 28866603 | C | T | exonic | HMBOX1 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr8 | 28837637 | 28837637 | C | T | exonic | HMBOX1 | nonsynonymous | UCEC|2|248|0.00806 |
- | chr8 | 28906606 | 28906606 | G | T | intronic | HMBOX1 | unknown | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr8 | 28908624 | 28908624 | C | T | exonic | HMBOX1 | synonymous | SKCM|1|368|0.00272 |
- | chr8 | 28876342 | 28876342 | C | T | exonic | HMBOX1 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr8 | 28876382 | 28876382 | G | T | exonic | HMBOX1 | nonsynonymous | ESCA|1|185|0.00541 |
rs141568231 | chr8 | 28908640 | 28908640 | G | A | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr8 | 28837649 | 28837649 | C | T | exonic | HMBOX1 | stopgain | SKCM|1|368|0.00272 |
- | chr8 | 28866664 | 28866664 | T | G | exonic | HMBOX1 | nonsynonymous | UCS|1|57|0.01754 |
- | chr8 | 28906483 | 28906483 | T | A | exonic | HMBOX1 | nonsynonymous | KIPAN|1|799|0.00125,KIRC|1|451|0.00222 |
- | chr8 | 28827712 | 28827712 | A | G | exonic | HMBOX1 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr8 | 28827654 | 28827654 | A | - | exonic | HMBOX1 | frameshift | BRCA|1|982|0.00102 |
rs749707939 | chr8 | 28908593 | 28908593 | C | T | exonic | HMBOX1 | nonsynonymous | UCEC|1|248|0.00403 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_RNA_DEPENDENT_DNA_BIOSYNTHETIC_PROCESS | BP | HMBOX1 |
GO_POSITIVE_REGULATION_OF_DNA_BIOSYNTHETIC_PROCESS | BP | HMBOX1 |
GO_POSITIVE_REGULATION_OF_BINDING | BP | HMBOX1 |
GO_REGULATION_OF_CHROMATIN_BINDING | BP | HMBOX1 |
GO_POSITIVE_REGULATION_OF_TELOMERASE_ACTIVITY | BP | HMBOX1 |
GO_REGULATION_OF_TELOMERE_MAINTENANCE | BP | HMBOX1 |
GO_POSITIVE_REGULATION_OF_TELOMERE_MAINTENANCE_VIA_TELOMERE_LENGTHENING | BP | HMBOX1 |
GO_POSITIVE_REGULATION_OF_TELOMERE_MAINTENANCE | BP | HMBOX1 |
GO_REGULATION_OF_DNA_BIOSYNTHETIC_PROCESS | BP | HMBOX1 |
GO_REGULATION_OF_TELOMERE_MAINTENANCE_VIA_TELOMERE_LENGTHENING | BP | HMBOX1 |
GO_REGULATION_OF_TELOMERASE_ACTIVITY | BP | HMBOX1 |
GO_NUCLEAR_CHROMOSOME_TELOMERIC_REGION | CC | HMBOX1 |
GO_TELOMERASE_HOLOENZYME_COMPLEX | CC | HMBOX1 |
GO_DNA_POLYMERASE_ACTIVITY | MF | HMBOX1 |
GO_RNA_DIRECTED_DNA_POLYMERASE_ACTIVITY | MF | HMBOX1 |
GO_TELOMERIC_DNA_BINDING | MF | HMBOX1 |
GO_NUCLEOTIDYLTRANSFERASE_ACTIVITY | MF | HMBOX1 |