Cancer CRCdb

TF information

TF name:	EBF1
TF family:	COE
Ensembl gene ID:	ENSG00000164330
Ensembl protein ID:	ENSP00000477809, ENSP00000370029, ENSP00000322898, ENSP00000428020
Entrez gene ID:	1879

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

Frequency of EBF1 in all biosamples

Download

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_078	Primary cell	Neuroblastoma	low-MYCN-Neuroblastoma-patient-cells	0.5
Sample_02_296	Cell line	Neuroblastoma	CLB-BER-Lud	0.327467482785
Sample_02_310	Cell line	Neuroblastoma	SJNB8	0.27064220183486
Sample_02_314	Cell line	Neuroblastoma	SK-N-FI	0.43827160493827

EBF1 distribution in samples’ most representative CRC

Download

Sample ID	Tissue type	Biosample type	Biosample name
Sample_02_296	Neuroblastoma	Cell line	CLB-BER-Lud
Sample_02_314	Neuroblastoma	Cell line	SK-N-FI

EBF1 distribution in all CRCs

Genomic distribution of SEs associated with EBF1

Download

Mutation of EBF1

Download

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of EBF1

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
rs141300956	chr5	158140132	158140132	G	A	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158223460	158223460	T	C	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158267047	158267047	C	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158526463	158526463	G	T	exonic	EBF1	synonymous	KICH\|1\|66\|0.01515,KIPAN\|1\|799\|0.00125
-	chr5	158141181	158141181	G	A	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158267047	158267047	C	A	exonic	EBF1	nonsynonymous	DLBC\|1\|48\|0.02083
-	chr5	158523361	158523361	G	C	exonic	EBF1	synonymous	LUAD\|1\|543\|0.00184
-	chr5	158135124	158135124	C	T	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
rs372984461	chr5	158223377	158223377	G	A	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
-	chr5	158140144	158140144	C	T	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
rs370733332	chr5	158135078	158135078	G	A	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158204441	158204441	G	T	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158223392	158223392	C	T	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158500456	158500465	TCTTGTCACA	-	exonic	EBF1	frameshift	SARC\|1\|247\|0.00405
rs766202151	chr5	158523388	158523388	G	A	exonic	EBF1	synonymous	BRCA\|1\|982\|0.00102
-	chr5	158522672	158522672	C	A	exonic	EBF1	stopgain	LUAD\|1\|543\|0.00184
-	chr5	158204450	158204450	T	C	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158139285	158139285	G	A	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158139238	158139238	G	A	exonic	EBF1	synonymous	COAD\|2\|367\|0.00545,COADREAD\|2\|489\|0.00409
rs776402214	chr5	158250238	158250238	G	A	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158158114	158158114	A	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158250203	158250203	C	T	exonic	EBF1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,UCEC\|1\|248\|0.00403
rs146847386	chr5	158139228	158139228	C	T	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158141123	158141123	A	G	splicing	EBF1	splicing	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs143146943	chr5	158139301	158139301	G	A	exonic	EBF1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158204526	158204526	G	T	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158135176	158135176	G	T	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158140139	158140139	C	A	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158140123	158140123	G	A	exonic	EBF1	synonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr5	158158109	158158109	G	C	exonic	EBF1	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr5	158140067	158140067	G	C	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr5	158141190	158141190	C	A	exonic	EBF1	stopgain	LUSC\|1\|178\|0.00562
-	chr5	158524048	158524048	G	A	exonic	EBF1	synonymous	OV\|1\|469\|0.00213
-	chr5	158204487	158204487	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158500435	158500435	C	T	exonic	EBF1	nonsynonymous	SKCM\|2\|368\|0.00543
-	chr5	158140136	158140136	G	A	exonic	EBF1	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr5	158250303	158250303	T	C	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158158144	158158144	T	C	exonic	EBF1	nonsynonymous	TGCT\|2\|155\|0.01290
rs761796846	chr5	158139296	158139296	G	A	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158523367	158523367	C	A	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158526597	158526597	T	-	UTR5	EBF1	unknown	STAD\|6\|395\|0.01519,STES\|6\|395\|0.01519
-	chr5	158139314	158139314	G	T	exonic	EBF1	stopgain	ACC\|1\|90\|0.01111
-	chr5	158204531	158204531	G	A	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158158108	158158108	C	G	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
rs778456440	chr5	158250212	158250212	C	T	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158223456	158223456	G	C	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158140134	158140134	C	T	exonic	EBF1	nonsynonymous	ESCA\|1\|185\|0.00541
rs146276323	chr5	158158158	158158158	G	A	exonic	EBF1	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr5	158250217	158250217	G	T	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158139237	158139237	C	A	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158140136	158140136	G	T	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158522656	158522656	A	G	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158250200	158250200	G	A	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
-	chr5	158139297	158139297	G	A	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
rs200547458	chr5	158158087	158158087	C	T	exonic	EBF1	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr5	158250197	158250197	A	C	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
rs570120838	chr5	158140057	158140057	G	A	exonic	EBF1	synonymous	GBM\|1\|290\|0.00345,GBMLGG\|2\|820\|0.00244,LGG\|1\|530\|0.00189
rs775985452	chr5	158126150	158126150	G	A	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158141168	158141168	G	A	exonic	EBF1	nonsynonymous	ESCA\|2\|185\|0.01081
-	chr5	158522653	158522653	C	T	exonic	EBF1	nonsynonymous	HNSC\|2\|512\|0.00391
rs371377954	chr5	158524021	158524021	G	A	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158223401	158223401	G	A	exonic	EBF1	synonymous	PAAD\|1\|185\|0.00541
-	chr5	158141128	158141128	G	C	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158139201	158139201	T	G	exonic	EBF1	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr5	158250310	158250310	T	C	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr5	158250240	158250240	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
rs556574598	chr5	158139314	158139314	G	A	exonic	EBF1	nonsynonymous	BRCA\|1\|982\|0.00102
rs766532365	chr5	158223429	158223429	G	A	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
rs781723383	chr5	158223455	158223455	C	T	exonic	EBF1	synonymous	BLCA\|1\|396\|0.00253,LUAD\|1\|543\|0.00184
-	chr5	158250326	158250326	C	T	splicing	EBF1	splicing	SKCM\|1\|368\|0.00272
-	chr5	158125829	158125829	-	A	UTR3	EBF1	unknown	ESCA\|1\|185\|0.00541
-	chr5	158141174	158141174	C	A	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158250217	158250217	G	A	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158524054	158524054	G	A	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
-	chr5	158250325	158250325	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158139231	158139231	C	T	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158526598	158526598	T	-	UTR5	EBF1	unknown	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158267100	158267100	G	A	exonic	EBF1	synonymous	LUAD\|2\|543\|0.00368
rs763968946	chr5	158139190	158139190	G	A	exonic	EBF1	synonymous	ESCA\|1\|185\|0.00541,LIHC\|1\|373\|0.00268
-	chr5	158158157	158158157	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr5	158141175	158141175	T	C	exonic	EBF1	nonsynonymous	THCA\|1\|504\|0.00198
rs751083175	chr5	158140003	158140003	G	A	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158141188	158141188	T	G	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs777669529	chr5	158140042	158140042	G	A	exonic	EBF1	synonymous	ACC\|1\|90\|0.01111
-	chr5	158250262	158250262	C	A	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158523370	158523370	A	G	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
rs751933144	chr5	158223440	158223440	C	T	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs768598275	chr5	158140131	158140131	C	T	exonic	EBF1	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr5	158139202	158139202	G	-	exonic	EBF1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158526367	158526367	G	A	exonic	EBF1	synonymous	PAAD\|1\|185\|0.00541
-	chr5	158139316	158139316	T	C	exonic	EBF1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158223376	158223376	C	T	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158524122	158524122	G	A	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158250251	158250251	A	G	exonic	EBF1	synonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
rs772391057	chr5	158126149	158126149	C	T	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158139300	158139300	C	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158204430	158204430	T	C	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158526363	158526363	C	A	exonic	EBF1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr5	158139179	158139179	G	T	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr5	158140013	158140013	A	T	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158140059	158140059	G	A	exonic	EBF1	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr5	158140043	158140043	C	G	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158135059	158135059	A	G	exonic	EBF1	nonsynonymous	LUAD\|4\|543\|0.00737
-	chr5	158141187	158141187	C	A	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158139206	158139206	G	A	exonic	EBF1	nonsynonymous	SKCM\|2\|368\|0.00543
-	chr5	158523369	158523369	G	T	exonic	EBF1	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr5	158135133	158135133	T	G	exonic	EBF1	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr5	158140129	158140129	G	T	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158139990	158139990	C	T	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs774638501	chr5	158250270	158250270	T	C	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs764404398	chr5	158500440	158500440	C	T	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158158157	158158157	C	G	exonic	EBF1	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr5	158135162	158135162	G	T	exonic	EBF1	synonymous	TGCT\|1\|155\|0.00645
-	chr5	158139180	158139180	C	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs768597902	chr5	158250237	158250237	C	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158223460	158223460	T	A	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs768501688	chr5	158204526	158204526	G	A	exonic	EBF1	nonsynonymous	ESCA\|1\|185\|0.00541
rs781578729	chr5	158524037	158524037	C	T	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158140014	158140014	C	T	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158141145	158141145	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
rs755362001	chr5	158223441	158223441	G	A	exonic	EBF1	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr5	158524093	158524093	G	T	exonic	EBF1	synonymous	TGCT\|1\|155\|0.00645
-	chr5	158223416	158223416	G	A	exonic	EBF1	synonymous	LUSC\|1\|178\|0.00562
-	chr5	158135102	158135103	GA	-	exonic	EBF1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158140039	158140039	C	T	exonic	EBF1	synonymous	HNSC\|2\|512\|0.00391,SKCM\|1\|368\|0.00272
-	chr5	158267086	158267086	T	G	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158267057	158267057	G	A	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158522658	158522658	G	A	exonic	EBF1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158524063	158524063	G	T	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158524020	158524020	C	T	exonic	EBF1	nonsynonymous	SKCM\|2\|368\|0.00543
-	chr5	158135029	158135029	G	T	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158126126	158126126	G	-	exonic	EBF1	frameshift	SARC\|1\|247\|0.00405
-	chr5	158139268	158139268	A	G	exonic	EBF1	synonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr5	158158152	158158152	G	-	exonic	EBF1	frameshift	HNSC\|1\|512\|0.00195
-	chr5	158140034	158140034	G	A	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
rs754162618	chr5	158139337	158139337	G	A	exonic	EBF1	synonymous	LUAD\|1\|543\|0.00184
-	chr5	158126044	158126044	C	G	UTR3	EBF1	unknown	CESC\|1\|194\|0.00515
-	chr5	158139244	158139244	G	A	exonic	EBF1	synonymous	HNSC\|1\|512\|0.00195
-	chr5	158267040	158267040	G	A	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
-	chr5	158135025	158135025	G	T	exonic	EBF1	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr5	158139994	158139994	T	C	exonic	EBF1	synonymous	HNSC\|1\|512\|0.00195
-	chr5	158158138	158158138	C	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs771261200	chr5	158141167	158141167	C	T	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158135175	158135175	G	A	exonic	EBF1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158135082	158135082	G	C	exonic	EBF1	stopgain	BRCA\|1\|982\|0.00102
-	chr5	158522676	158522676	C	T	exonic	EBF1	synonymous	HNSC\|1\|512\|0.00195
-	chr5	158135111	158135111	G	T	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158523397	158523397	C	T	exonic	EBF1	synonymous	UCEC\|1\|248\|0.00403
-	chr5	158524010	158524010	G	T	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158526373	158526373	G	A	exonic	EBF1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr5	158140094	158140094	T	A	exonic	EBF1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr5	158523398	158523398	T	C	exonic	EBF1	nonsynonymous	TGCT\|1\|155\|0.00645
-	chr5	158140122	158140122	C	T	exonic	EBF1	nonsynonymous	UCS\|1\|57\|0.01754
-	chr5	158158077	158158077	C	A	exonic	EBF1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189,LUAD\|1\|543\|0.00184
-	chr5	158135132	158135132	-	T	exonic	EBF1	frameshift	STAD\|2\|395\|0.00506,STES\|2\|395\|0.00506
-	chr5	158223456	158223456	G	T	exonic	EBF1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr5	158524086	158524086	G	A	exonic	EBF1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr5	158523987	158523987	C	T	exonic	EBF1	nonsynonymous	SKCM\|1\|368\|0.00272
rs780793034	chr5	158140087	158140087	T	C	exonic	EBF1	synonymous	SKCM\|1\|368\|0.00272
-	chr5	158204508	158204508	G	T	exonic	EBF1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158135143	158135143	G	T	exonic	EBF1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr5	158523987	158523987	C	A	exonic	EBF1	stopgain	THYM\|1\|123\|0.00813

Disease information of EBF1

Download

TF_name	Disease_name	Disease_class	Disease_semantic_type	TF_disease_source
EBF1	Neoplastic Cell Transformation	C04;C23	Neoplastic Process	CTD_human
EBF1	Lymphoma, Follicular	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Respiratory Distress Syndrome, Adult	C08	Disease or Syndrome	CTD_human
EBF1	Lymphoma, Large-Cell, Follicular	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Lymphoma, Mixed-Cell, Follicular	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Lymphoma, Small Cleaved-Cell, Follicular	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Lymphoma, Follicular, Grade 1	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Lymphoma, Follicular, Grade 3	C04;C15;C20	Neoplastic Process	CTD_human
EBF1	Lymphoma, Follicular, Grade 2	C04;C15;C20	Neoplastic Process	CTD_human

Pathway associated with EBF1

Download

pathway_ID	pathway_name	pathway_source	gene_number	edge_number
pathway0000069	Activation of gene expression by SREBF (SREBP)	reactome	42	266
pathway0001078	ID	netpath	38	213
pathway0001828	Regulation of cholesterol biosynthesis by SREBP (SREBF)	reactome	15	53
pathway0001940	RORA activates gene expression	reactome	27	204
pathway0001947	RXR and RAR heterodimerization with other nuclear receptor	pid	26	164
pathway0002302	Transcriptional regulation of white adipocyte differentiation	reactome	79	1522
pathway0002686	Hs_Tryptophan_metabolism_WP465_85055	wikipathways	45	103
pathway0002700	Hs_Signaling_of_Hepatocyte_Growth_Factor_Receptor_WP313_79946	wikipathways	15	18
pathway0002798	Hs_AMP-activated_Protein_Kinase_(AMPK)_Signaling_WP1403_90259	wikipathways	11	15
pathway0002806	Hs_Sterol_Regulatory_Element-Binding_Proteins_(SREBP)_signalling_WP1982_90425	wikipathways	15	31
pathway0002857	Hs_SREBF_and_miR33_in_cholesterol_and_lipid_homeostasis_WP2011_89947	wikipathways	6	12
pathway0002878	Hs_ID_signaling_pathway_WP53_67360	wikipathways	8	12

Go term information of EBF1

Download

GO_term_name	GO_term_type	TF_name
GO_REGULATION_OF_TRIGLYCERIDE_METABOLIC_PROCESS	BP	EBF1
GO_REGULATION_OF_HISTONE_DEACETYLATION	BP	EBF1
GO_REGULATION_OF_PROTEIN_DEACETYLATION	BP	EBF1
GO_REGULATION_OF_HORMONE_LEVELS	BP	EBF1
GO_RESPONSE_TO_FOOD	BP	EBF1
GO_POSITIVE_REGULATION_OF_ALCOHOL_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_POSITIVE_REGULATION_OF_CELLULAR_COMPONENT_ORGANIZATION	BP	EBF1
GO_REGULATION_OF_FATTY_ACID_METABOLIC_PROCESS	BP	EBF1
GO_REGULATION_OF_CHOLESTEROL_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_POSITIVE_REGULATION_OF_STEROID_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_RESPONSE_TO_GLUCAGON	BP	EBF1
GO_POSITIVE_REGULATION_OF_HISTONE_DEACETYLATION	BP	EBF1
GO_REGULATION_OF_LIPID_METABOLIC_PROCESS	BP	EBF1
GO_RESPONSE_TO_CAMP	BP	EBF1
GO_NEGATIVE_REGULATION_OF_PROTEIN_SECRETION	BP	EBF1
GO_POSITIVE_REGULATION_OF_TRIGLYCERIDE_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_POSITIVE_REGULATION_OF_CHROMATIN_MODIFICATION	BP	EBF1
GO_REGULATION_OF_MITOPHAGY	BP	EBF1
GO_RESPONSE_TO_PROGESTERONE	BP	EBF1
GO_CELLULAR_RESPONSE_TO_FATTY_ACID	BP	EBF1
GO_MRNA_TRANSCRIPTION	BP	EBF1
GO_POSITIVE_REGULATION_OF_CHROMOSOME_ORGANIZATION	BP	EBF1
GO_POSITIVE_REGULATION_OF_PROTEIN_DEACETYLATION	BP	EBF1
GO_REGULATION_OF_STEROID_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_RESPONSE_TO_RETINOIC_ACID	BP	EBF1
GO_REGULATION_OF_CHOLESTEROL_METABOLIC_PROCESS	BP	EBF1
GO_REGULATION_OF_TRIGLYCERIDE_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_REGULATION_OF_ALCOHOL_BIOSYNTHETIC_PROCESS	BP	EBF1
GO_POSITIVE_REGULATION_OF_TRIGLYCERIDE_METABOLIC_PROCESS	BP	EBF1
GO_POSITIVE_REGULATION_OF_STEROID_METABOLIC_PROCESS	BP	EBF1
GO_REGULATION_OF_PROTEIN_TARGETING	BP	EBF1
GO_MRNA_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER	BP	EBF1
GO_ER_TO_GOLGI_TRANSPORT_VESICLE	CC	EBF1
GO_ER_TO_GOLGI_TRANSPORT_VESICLE_MEMBRANE	CC	EBF1
GO_NUCLEAR_OUTER_MEMBRANE_ENDOPLASMIC_RETICULUM_MEMBRANE_NETWORK	CC	EBF1
GO_C2H2_ZINC_FINGER_DOMAIN_BINDING	MF	EBF1
GO_TRANSCRIPTION_FACTOR_ACTIVITY_RNA_POLYMERASE_II_CORE_PROMOTER_PROXIMAL_REGION_SEQUENCE_SPECIFIC_BINDING	MF	EBF1
GO_CHROMATIN_BINDING	MF	EBF1
GO_CORE_PROMOTER_PROXIMAL_REGION_DNA_BINDING	MF	EBF1

Survival analysis of EBF1

Methods

Overall Survival

Disease Free Survival (RFS)

Group Cutoff

Median

Quartile

Custom

Cutoff-High(%)

Hazards Ratio (HR) Calculate the hazards ratio based on Cox PH Model.

95% Confidence Interval Add the 95% CI as dotted line.

Axis Units

Expression of EBF1

Pan cancer (TCGA) Cell line (ENCODE) In vitro differentiated cell (ENCODE) Primary cell (ENCODE) Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)