Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_01_046 | Cell line | Mammary Gland | MCF-7 | 0.3 |
Sample_02_095 | Cell line | Mammary Gland | MDA-MB-468 | 0.19027237354086 |
Sample_02_166 | Cell line | Mammary Gland | HCC1954_Parental | 0.356 |
Sample_02_181 | Cell line | Human melanoma | COLO679 | 0.10133333333333 |
Sample_02_183 | Cell line | Skin | SKMEL2 | 0.25641025641026 |
Sample_02_219 | Cell line | Mammary Gland | MDA-MB-231 | 0.52941176470588 |
Sample_02_267 | Cell line | Kidney | 786-O | 0.2 |
Sample_02_268 | Cell line | Kidney | A-498 | 0.061103932065719 |
Sample_02_310 | Cell line | Neuroblastoma | SJNB8 | 0.011140235910878 |
Sample_02_317 | Cell line | Neuroblastoma | GICAN | 0.12162162162162 |
Sample_02_322 | Cell line | Colon | Caco-2 | 0.2436069986541 |
Sample_02_354 | Cell line | Colon | Colo205 | 0.12012012012012 |
Sample_02_430 | Cell line | Kidney | 12364284 | 0.41071428571429 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_02_317 | Neuroblastoma | Cell line | GICAN |
Sample_02_430 | Kidney | Cell line | 12364284 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr7 | 137567275 | 137567275 | G | A | exonic | CREB3L2 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr7 | 137569739 | 137569739 | A | G | splicing | CREB3L2 | splicing | PRAD|1|499|0.00200 |
- | chr7 | 137590506 | 137590506 | G | A | exonic | CREB3L2 | nonsynonymous | BLCA|2|396|0.00505 |
- | chr7 | 137569813 | 137569813 | G | A | exonic | CREB3L2 | nonsynonymous | PAAD|1|185|0.00541 |
- | chr7 | 137567230 | 137567230 | T | A | exonic | CREB3L2 | nonsynonymous | LIHC|1|373|0.00268 |
rs756754073 | chr7 | 137570244 | 137570244 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|2|368|0.00543 |
- | chr7 | 137597817 | 137597817 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137612918 | 137612918 | G | A | exonic | CREB3L2 | synonymous | LIHC|1|373|0.00268 |
rs758797783 | chr7 | 137686380 | 137686380 | G | A | exonic | CREB3L2 | synonymous | GBM|1|290|0.00345,GBMLGG|1|820|0.00122 |
- | chr7 | 137600734 | 137600734 | T | C | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137590509 | 137590509 | A | G | exonic | CREB3L2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr7 | 137613106 | 137613106 | A | G | exonic | CREB3L2 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr7 | 137586170 | 137586170 | T | A | splicing | CREB3L2 | splicing | LUAD|4|543|0.00737 |
- | chr7 | 137597695 | 137597695 | C | A | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr7 | 137569746 | 137569746 | G | T | exonic | CREB3L2 | nonsynonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
rs769155043 | chr7 | 137593039 | 137593039 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137590526 | 137590526 | A | T | exonic | CREB3L2 | stopgain | SKCM|1|368|0.00272 |
- | chr7 | 137567190 | 137567190 | C | A | exonic | CREB3L2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr7 | 137686423 | 137686423 | C | A | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr7 | 137613095 | 137613095 | - | CA | exonic | CREB3L2 | frameshift | BRCA|1|982|0.00102 |
- | chr7 | 137588741 | 137588741 | C | A | exonic | CREB3L2 | nonsynonymous | COADREAD|1|489|0.00204,READ|1|122|0.00820 |
- | chr7 | 137597730 | 137597730 | G | A | exonic | CREB3L2 | nonsynonymous | BRCA|1|982|0.00102 |
rs778038461 | chr7 | 137600659 | 137600659 | G | A | exonic | CREB3L2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,SKCM|1|368|0.00272 |
- | chr7 | 137586133 | 137586133 | C | A | exonic | CREB3L2 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr7 | 137613027 | 137613027 | G | A | exonic | CREB3L2 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr7 | 137597637 | 137597637 | C | A | exonic | CREB3L2 | nonsynonymous | UCEC|1|248|0.00403 |
rs146953741 | chr7 | 137612996 | 137612996 | C | T | exonic | CREB3L2 | synonymous | SKCM|2|368|0.00543 |
- | chr7 | 137600629 | 137600629 | G | A | exonic | CREB3L2 | nonsynonymous | OV|1|469|0.00213 |
rs368188380 | chr7 | 137613005 | 137613005 | C | T | exonic | CREB3L2 | synonymous | UCEC|1|248|0.00403 |
rs148366639 | chr7 | 137570171 | 137570171 | G | A | exonic | CREB3L2 | nonsynonymous | LUSC|1|178|0.00562 |
- | chr7 | 137567363 | 137567363 | T | C | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr7 | 137570248 | 137570248 | C | T | exonic | CREB3L2 | synonymous | BLCA|1|396|0.00253 |
rs149450359 | chr7 | 137567349 | 137567349 | G | A | exonic | CREB3L2 | synonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr7 | 137597699 | 137597699 | A | T | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
rs747151734 | chr7 | 137565290 | 137565290 | C | T | exonic | CREB3L2 | nonsynonymous | ESCA|1|185|0.00541,PAAD|1|185|0.00541,STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr7 | 137567316 | 137567316 | G | A | exonic | CREB3L2 | synonymous | UCEC|1|248|0.00403 |
- | chr7 | 137686407 | 137686407 | G | T | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
rs140359406 | chr7 | 137612936 | 137612936 | C | T | exonic | CREB3L2 | synonymous | UCEC|1|248|0.00403 |
- | chr7 | 137600584 | 137600584 | C | A | exonic | CREB3L2 | nonsynonymous | LUAD|6|543|0.01105 |
- | chr7 | 137567227 | 137567227 | A | G | exonic | CREB3L2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr7 | 137590524 | 137590524 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137612945 | 137612945 | C | T | exonic | CREB3L2 | synonymous | PAAD|1|185|0.00541 |
- | chr7 | 137567225 | 137567225 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137567210 | 137567210 | A | G | exonic | CREB3L2 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr7 | 137567330 | 137567330 | C | T | exonic | CREB3L2 | nonsynonymous | CESC|1|194|0.00515 |
- | chr7 | 137612987 | 137612987 | G | A | exonic | CREB3L2 | synonymous | LUAD|1|543|0.00184 |
- | chr7 | 137569837 | 137569837 | C | G | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr7 | 137567265 | 137567265 | G | A | exonic | CREB3L2 | synonymous | CESC|1|194|0.00515 |
rs762334014 | chr7 | 137590448 | 137590448 | C | A | exonic | CREB3L2 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr7 | 137686398 | 137686398 | C | T | exonic | CREB3L2 | synonymous | ESCA|1|185|0.00541 |
- | chr7 | 137569712 | 137569712 | C | A | intronic | CREB3L2 | unknown | LUAD|1|543|0.00184 |
- | chr7 | 137593098 | 137593098 | C | T | exonic | CREB3L2 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr7 | 137613044 | 137613044 | G | C | exonic | CREB3L2 | synonymous | OV|1|469|0.00213 |
- | chr7 | 137590553 | 137590553 | C | T | exonic | CREB3L2 | synonymous | UCEC|1|248|0.00403 |
- | chr7 | 137613100 | 137613100 | - | C | exonic | CREB3L2 | frameshift | BRCA|1|982|0.00102 |
- | chr7 | 137590467 | 137590467 | C | A | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
rs776621858 | chr7 | 137593044 | 137593044 | C | T | exonic | CREB3L2 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr7 | 137686444 | 137686444 | A | G | exonic | CREB3L2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr7 | 137612997 | 137612997 | G | A | exonic | CREB3L2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr7 | 137593038 | 137593038 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr7 | 137686374 | 137686374 | G | C | exonic | CREB3L2 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr7 | 137590460 | 137590460 | C | G | exonic | CREB3L2 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr7 | 137686449 | 137686449 | C | T | exonic | CREB3L2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr7 | 137613070 | 137613070 | C | A | exonic | CREB3L2 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr7 | 137600703 | 137600703 | G | C | exonic | CREB3L2 | nonsynonymous | BRCA|2|982|0.00204 |
- | chr7 | 137593138 | 137593138 | G | A | exonic | CREB3L2 | nonsynonymous | KIPAN|1|799|0.00125,KIRC|1|451|0.00222 |
- | chr7 | 137590566 | 137590566 | A | T | exonic | CREB3L2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr7 | 137590525 | 137590525 | G | A | exonic | CREB3L2 | nonsynonymous | LUSC|1|178|0.00562 |
- | chr7 | 137586166 | 137586166 | A | G | exonic | CREB3L2 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr7 | 137569784 | 137569784 | C | T | exonic | CREB3L2 | synonymous | OV|1|469|0.00213 |
- | chr7 | 137569752 | 137569752 | G | - | exonic | CREB3L2 | frameshift | PRAD|1|499|0.00200 |
- | chr7 | 137567335 | 137567335 | G | A | exonic | CREB3L2 | nonsynonymous | SKCM|1|368|0.00272 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|---|---|---|---|
CREB3L2 | Fibromyxosarcoma | Neoplastic Process | ORPHANET |
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|---|---|---|---|
pathway0001005 | Heterotrimeric G-protein signaling pathway-Gi alpha and Gs alpha mediated pathway | panther | 126 | 1529 |
pathway0002297 | Transcription regulation by bZIP transcription factor | panther | 42 | 653 |
pathway0002627 | Melanogenesis | kegg | 100 | 1225 |
pathway0002633 | Vasopressin-regulated water reabsorption | kegg | 35 | 126 |
pathway0002662 | Prostate cancer | kegg | 85 | 1261 |
pathway0002688 | Hs_TYROBP_Causal_Network_WP3945_90843 | wikipathways | 54 | 71 |
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_RESPONSE_TO_ENDOPLASMIC_RETICULUM_STRESS | BP | CREB3L2 |
GO_ESTABLISHMENT_OF_LOCALIZATION_IN_CELL | BP | CREB3L2 |
GO_CELLULAR_RESPONSE_TO_TOPOLOGICALLY_INCORRECT_PROTEIN | BP | CREB3L2 |
GO_CHONDROCYTE_DIFFERENTIATION | BP | CREB3L2 |
GO_CAMP_RESPONSE_ELEMENT_BINDING | MF | CREB3L2 |