Sample overview of 12364284

Sample ID: Sample_02_430
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 12364284
Data source: NCBI GEO/SRA
GSE ID: GSE86087
Cancer type: clear cell renal cell carcinoma
CRC number: 56
TF number of all CRCs: 28
TF list of all CRCs: POU3F3, SMAD3, HNF1B, TEAD1, ETS1, NR3C1, NR2F2, RARA, IRF1, MEF2D, BHLHE40, CREB3L2, FOXP1, ETV6, CREB5, HES1, JUNB, FOSL2, RUNX1, PAX2, NFE2L2, ATF3, MNT, HOXB2, SP3, RFX2, BHLHE41, ARID5B

The most representative CRC of 12364284
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Relationship plot of CRC model
TF number of this CRC: 11
CRC socre: 38
TF list of the most representative CRC
TF name TF family Frequency of TFs
BHLHE40 bHLH 26 / 56
CREB3L2 TF_bZIP 23 / 56
ETS1 ETS 40 / 56
HNF1B Homeobox 49 / 56
NR2F2 RXR-like 38 / 56
NR3C1 ESR-like 40 / 56
PAX2 PAX 14 / 56
POU3F3 Pou 56 / 56
RARA THR-like 36 / 56
SMAD3 MH1 56 / 56
TEAD1 TEA 40 / 56

All CRCs of 12364284
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CRC rank TF list of CRCs CRC score TF number of CRC Detail of CRC

Frequency of TFs that appear in CRCs
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TF name Frequency of TFs TF family Ensembl ID
POU3F3 56 / 56 Pou ENSG00000198914
SMAD3 56 / 56 MH1 ENSG00000166949
HNF1B 49 / 56 Homeobox ENSG00000275410
TEAD1 40 / 56 TEA ENSG00000187079
ETS1 40 / 56 ETS ENSG00000134954
NR3C1 40 / 56 ESR-like ENSG00000113580
NR2F2 38 / 56 RXR-like ENSG00000185551
RARA 36 / 56 THR-like ENSG00000131759
IRF1 30 / 56 IRF ENSG00000125347
MEF2D 28 / 56 SRF ENSG00000116604
BHLHE40 26 / 56 bHLH ENSG00000134107
CREB3L2 23 / 56 TF_bZIP ENSG00000182158
FOXP1 21 / 56 Fork_head ENSG00000114861
ETV6 20 / 56 ETS ENSG00000139083
CREB5 18 / 56 TF_bZIP ENSG00000146592
HES1 16 / 56 bHLH ENSG00000114315
RUNX1 15 / 56 Runt ENSG00000159216
FOSL2 15 / 56 TF_bZIP ENSG00000075426
JUNB 15 / 56 TF_bZIP ENSG00000171223
PAX2 14 / 56 PAX ENSG00000075891
NFE2L2 14 / 56 TF_bZIP ENSG00000116044
ATF3 11 / 56 TF_bZIP ENSG00000162772
MNT 10 / 56 bHLH ENSG00000070444
RFX2 7 / 56 RFX ENSG00000087903
SP3 7 / 56 zf-C2H2 ENSG00000172845
HOXB2 7 / 56 Homeobox ENSG00000173917
BHLHE41 6 / 56 bHLH ENSG00000123095
ARID5B 2 / 56 ARID ENSG00000150347

Indegree and outdegree of TFs
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TF name Indegree Outdegree Node connections
FOXP1 25 45 70
SMAD3 32 45 77
TEAD1 29 45 74
MEF2D 27 42 69
NFE2L2 24 45 69
MNT 29 25 54
NR2F2 31 45 76
HNF1B 32 44 76
ETS1 31 45 76
FOSL2 28 41 69
POU3F3 32 44 76
RARA 29 45 74
NR3C1 31 45 76
JUNB 28 42 70
HOXB2 29 32 61
CREB5 32 29 61
SP3 23 44 67
PAX2 27 35 62
IRF1 29 45 74
ARID5B 25 30 55
ETV6 25 43 68
RFX2 21 43 64
CREB3L2 29 37 66
BHLHE40 31 40 71
RUNX1 24 45 69
BHLHE41 28 30 58
HES1 26 34 60
ATF3 26 37 63

Expression of TFs in all CRCs