Sample ID: | Sample_02_303 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | LAN1 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 35 |
TF number of all CRCs: | 21 |
TF list of all CRCs: | FOXO3, PHOX2B, RARA, GATA3, PHOX2A, SOX9, TBX2, KLF13, MEIS2, KLF7, RXRA, TEAD1, LBX2, TLX2, GATA2, MAZ, SATB1, E2F2, ZNF217, SIX3, NFIB |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
FOXO3 | 33 / 35 | Fork_head | ENSG00000118689 |
PHOX2B | 33 / 35 | Homeobox | ENSG00000109132 |
RARA | 31 / 35 | THR-like | ENSG00000131759 |
GATA3 | 24 / 35 | zf-GATA | ENSG00000107485 |
SOX9 | 23 / 35 | HMG | ENSG00000125398 |
PHOX2A | 23 / 35 | Homeobox | ENSG00000165462 |
TBX2 | 19 / 35 | T-box | ENSG00000121068 |
KLF13 | 18 / 35 | zf-C2H2 | ENSG00000169926 |
MEIS2 | 17 / 35 | Homeobox | ENSG00000134138 |
RXRA | 16 / 35 | RXR-like | ENSG00000186350 |
KLF7 | 16 / 35 | zf-C2H2 | ENSG00000118263 |
TEAD1 | 12 / 35 | TEA | ENSG00000187079 |
TLX2 | 12 / 35 | Homeobox | ENSG00000115297 |
LBX2 | 12 / 35 | Homeobox | ENSG00000179528 |
GATA2 | 10 / 35 | zf-GATA | ENSG00000179348 |
MAZ | 10 / 35 | zf-C2H2 | ENSG00000103495 |
SATB1 | 8 / 35 | CUT | ENSG00000182568 |
E2F2 | 8 / 35 | E2F | ENSG00000007968 |
ZNF217 | 3 / 35 | zf-C2H2 | ENSG00000171940 |
SIX3 | 2 / 35 | Homeobox | ENSG00000138083 |
NFIB | 2 / 35 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ZNF217 | 21 | 17 | 38 |
TBX2 | 20 | 38 | 58 |
SOX9 | 19 | 41 | 60 |
TEAD1 | 20 | 36 | 56 |
KLF13 | 24 | 37 | 61 |
MEIS2 | 22 | 39 | 61 |
SIX3 | 17 | 24 | 41 |
KLF7 | 23 | 33 | 56 |
RARA | 23 | 39 | 62 |
NFIB | 6 | 22 | 28 |
LBX2 | 19 | 37 | 56 |
RXRA | 22 | 38 | 60 |
SATB1 | 20 | 35 | 55 |
PHOX2B | 25 | 39 | 64 |
GATA2 | 24 | 33 | 57 |
GATA3 | 25 | 37 | 62 |
FOXO3 | 24 | 40 | 64 |
PHOX2A | 22 | 38 | 60 |
E2F2 | 21 | 32 | 53 |
MAZ | 19 | 38 | 57 |
TLX2 | 19 | 39 | 58 |