TF information

TF name: LBX2
TF family: Homeobox
Ensembl gene ID: ENSG00000179528
Ensembl protein ID: ENSP00000366789, ENSP00000417116
Entrez gene ID: 85474
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of LBX2 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_302Cell lineNeuroblastomaIMR320.28571428571429
Sample_02_303Cell lineNeuroblastomaLAN10.34285714285714
Sample_02_304Cell lineNeuroblastomaN2060.1820652173913
Sample_02_313Cell lineNeuroblastomaSK-N-DZ0.12355212355212
Sample_02_318Cell lineNeuroblastomaNB690.203125

LBX2 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name

LBX2 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with LBX2
Download

Mutation of LBX2
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of LBX2

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr27472524974725249CTexonicLBX2synonymous BRCA|1|982|0.00102
-chr27472518474725184GAexonicLBX2nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr27472997774729977T-exonicLBX2frameshift PAAD|2|185|0.01081
-chr27472518674725186GCexonicLBX2synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr27472506474725064ATexonicLBX2nonsynonymous LUAD|2|543|0.00368
-chr27472509674725096GAexonicLBX2synonymous BRCA|1|982|0.00102
-chr27472992374729924CT-exonicLBX2frameshift STAD|1|395|0.00253,STES|1|395|0.00253
rs763180732chr27472981474729814GAexonicLBX2nonsynonymous CESC|1|194|0.00515
-chr27472510074725100TGexonicLBX2nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr27472525274725252GCexonicLBX2nonsynonymous LUAD|1|543|0.00184
rs763890176chr27472993974729939-CexonicLBX2frameshift BRCA|1|982|0.00102
-chr27472523974725239CTexonicLBX2nonsynonymous BLCA|1|396|0.00253
-chr27472509374725093CTexonicLBX2synonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr27472654374726543GCexonicLBX2nonsynonymous THYM|1|123|0.00813
-chr27472661774726617GAexonicLBX2synonymous CESC|1|194|0.00515
-chr27472526174725261GAexonicLBX2synonymous BLCA|1|396|0.00253
-chr27472519374725193GAexonicLBX2nonsynonymous BLCA|1|396|0.00253,LUAD|1|543|0.00184
rs149381878chr27472989274729892GAexonicLBX2nonsynonymous SKCM|1|368|0.00272
-chr27472519574725195-CGAexonicLBX2nonframeshift KIPAN|1|799|0.00125,KIRP|1|282|0.00355
-chr27472512374725123GCexonicLBX2synonymous ESCA|1|185|0.00541
-chr27472980474729804GAexonicLBX2synonymous GBM|1|290|0.00345,GBMLGG|1|820|0.00122
-chr27472513674725136GAexonicLBX2nonsynonymous LUAD|1|543|0.00184
-chr27472540874725408GAexonicLBX2synonymous HNSC|1|512|0.00195
-chr27472513074725130GAexonicLBX2nonsynonymous SKCM|1|368|0.00272
rs17009998chr27472517874725178GAexonicLBX2nonsynonymous KICH|1|66|0.01515,KIPAN|1|799|0.00125
-chr27472514174725141GAexonicLBX2synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr27472515074725150CTexonicLBX2synonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr27472994074729940C-exonicLBX2frameshift COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|2|395|0.00506,STES|2|395|0.00506

Disease information of LBX2
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source

Pathway associated with LBX2
pathway_ID pathway_name pathway_source gene_number edge_number

Go term information of LBX2
GO_term_name GO_term_type TF_name

Survival analysis of LBX2



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of LBX2