Sample ID: | Sample_02_338 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | BE2 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE65664 |
Cancer type: | Neuroblastoma |
CRC number: | 68 |
TF number of all CRCs: | 27 |
TF list of all CRCs: | FEV, KLF16, GATA3, MEF2D, KLF7, SP1, JUNB, ESRRG, MEIS2, TBX2, ZBTB7B, RARA, GATA2, ARID5B, HOXC4, SOX4, TCF4, ERF, HES1, FOSL2, ISL1, NFATC4, SHOX2, PROX1, ETV1, TCF7L2, NFIB |
TF name | TF family | Frequency of TFs |
---|---|---|
ESRRG | ESR-like | 36 / 68 |
FEV | ETS | 44 / 68 |
GATA3 | zf-GATA | 43 / 68 |
JUNB | TF_bZIP | 39 / 68 |
KLF16 | zf-C2H2 | 44 / 68 |
KLF7 | zf-C2H2 | 40 / 68 |
MEF2D | SRF | 43 / 68 |
MEIS2 | Homeobox | 36 / 68 |
RARA | THR-like | 22 / 68 |
SP1 | zf-C2H2 | 40 / 68 |
TBX2 | T-box | 32 / 68 |
ZBTB7B | ZBTB | 28 / 68 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
FEV | 44 / 68 | ETS | ENSG00000163497 |
KLF16 | 44 / 68 | zf-C2H2 | ENSG00000129911 |
GATA3 | 43 / 68 | zf-GATA | ENSG00000107485 |
MEF2D | 43 / 68 | SRF | ENSG00000116604 |
KLF7 | 40 / 68 | zf-C2H2 | ENSG00000118263 |
SP1 | 40 / 68 | zf-C2H2 | ENSG00000185591 |
JUNB | 39 / 68 | TF_bZIP | ENSG00000171223 |
ESRRG | 36 / 68 | ESR-like | ENSG00000196482 |
MEIS2 | 36 / 68 | Homeobox | ENSG00000134138 |
TBX2 | 32 / 68 | T-box | ENSG00000121068 |
ZBTB7B | 28 / 68 | ZBTB | ENSG00000160685 |
RARA | 22 / 68 | THR-like | ENSG00000131759 |
GATA2 | 21 / 68 | zf-GATA | ENSG00000179348 |
ARID5B | 19 / 68 | ARID | ENSG00000150347 |
HOXC4 | 18 / 68 | Homeobox | ENSG00000198353 |
SOX4 | 18 / 68 | HMG | ENSG00000124766 |
TCF4 | 15 / 68 | bHLH | ENSG00000196628 |
ERF | 12 / 68 | ETS | ENSG00000105722 |
FOSL2 | 10 / 68 | TF_bZIP | ENSG00000075426 |
HES1 | 10 / 68 | bHLH | ENSG00000114315 |
ISL1 | 9 / 68 | Homeobox | ENSG00000016082 |
NFATC4 | 8 / 68 | RHD | ENSG00000100968 |
SHOX2 | 8 / 68 | Homeobox | ENSG00000168779 |
ETV1 | 4 / 68 | NA | NA |
PROX1 | 4 / 68 | HPD | ENSG00000117707 |
TCF7L2 | 3 / 68 | HMG | ENSG00000148737 |
NFIB | 1 / 68 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
NFATC4 | 16 | 48 | 64 |
TCF4 | 20 | 37 | 57 |
ISL1 | 27 | 34 | 61 |
ESRRG | 25 | 48 | 73 |
TBX2 | 26 | 49 | 75 |
SOX4 | 21 | 51 | 72 |
RARA | 22 | 53 | 75 |
KLF16 | 24 | 53 | 77 |
PROX1 | 26 | 27 | 53 |
MEIS2 | 24 | 51 | 75 |
KLF7 | 25 | 48 | 73 |
FOSL2 | 22 | 36 | 58 |
JUNB | 28 | 40 | 68 |
ZBTB7B | 24 | 44 | 68 |
SP1 | 24 | 54 | 78 |
HOXC4 | 22 | 42 | 64 |
FEV | 27 | 42 | 69 |
SHOX2 | 17 | 40 | 57 |
GATA2 | 26 | 40 | 66 |
GATA3 | 27 | 47 | 74 |
ETV1 | 24 | 26 | 50 |
NFIB | 7 | 29 | 36 |
ARID5B | 23 | 40 | 63 |
ERF | 26 | 33 | 59 |
TCF7L2 | 13 | 52 | 65 |
MEF2D | 27 | 48 | 75 |
HES1 | 23 | 33 | 56 |