Sample overview of YCC3

Sample ID: Sample_02_208
Biosample type: Cell line
Tissue type: Stomach
Biosample name: YCC3
Data source: NCBI GEO/SRA
GSE ID: GSE75898
Cancer type: Gastric Cancer
CRC number: 8
TF number of all CRCs: 15
TF list of all CRCs: FOXQ1, EHF, KLF5, ELF3, MYC, FOSL2, HES1, CEBPA, SREBF1, MAFK, BHLHE40, GATA6, ZNF217, HOXA2, MNT

The most representative CRC of YCC3
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Relationship plot of CRC model
TF number of this CRC: 8
CRC socre: 6.125
TF list of the most representative CRC
TF name TF family Frequency of TFs
EHF ETS 7 / 8
ELF3 ETS 7 / 8
FOSL2 TF_bZIP 6 / 8
FOXQ1 Fork_head 8 / 8
HES1 bHLH 6 / 8
HOXA2 Homeobox 1 / 8
KLF5 zf-C2H2 7 / 8
MYC bHLH 7 / 8

All CRCs of YCC3
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CRC rank TF list of CRCs CRC score TF number of CRC Detail of CRC

Frequency of TFs that appear in CRCs
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TF name Frequency of TFs TF family Ensembl ID
FOXQ1 8 / 8 Fork_head ENSG00000164379
EHF 7 / 8 ETS ENSG00000135373
ELF3 7 / 8 ETS ENSG00000163435
KLF5 7 / 8 zf-C2H2 ENSG00000102554
MYC 7 / 8 bHLH ENSG00000136997
FOSL2 6 / 8 TF_bZIP ENSG00000075426
HES1 6 / 8 bHLH ENSG00000114315
CEBPA 3 / 8 TF_bZIP ENSG00000245848
MAFK 3 / 8 TF_bZIP ENSG00000198517
SREBF1 3 / 8 bHLH ENSG00000072310
BHLHE40 2 / 8 bHLH ENSG00000134107
GATA6 2 / 8 zf-GATA ENSG00000141448
ZNF217 2 / 8 zf-C2H2 ENSG00000171940
HOXA2 1 / 8 Homeobox ENSG00000105996
MNT 1 / 8 bHLH ENSG00000070444

Indegree and outdegree of TFs
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TF name Indegree Outdegree Node connections
ZNF217 15 17 32
MAFK 14 27 41
ELF3 17 27 44
CEBPA 16 19 35
MNT 15 13 28
KLF5 17 25 42
FOSL2 17 26 43
MYC 17 27 44
FOXQ1 18 27 45
EHF 16 26 42
GATA6 18 17 35
BHLHE40 13 24 37
SREBF1 14 27 41
HOXA2 12 19 31
HES1 16 19 35

Expression of TFs in all CRCs