Sample overview of SNU719

Sample ID: Sample_02_191
Biosample type: Cell line
Tissue type: Stomach
Biosample name: SNU719
Data source: NCBI GEO/SRA
GSE ID: GSE75595
Cancer type: Gastric Cancer
CRC number: 14
TF number of all CRCs: 12
TF list of all CRCs: MAFK, NR4A2, FOXQ1, KLF3, ASCL2, HES1, BHLHE40, MYB, MYC, FOSL2, ZNF217, MNT

The most representative CRC of SNU719
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Relationship plot of CRC model
TF number of this CRC: 5
CRC socre: 8.4
TF list of the most representative CRC
TF name TF family Frequency of TFs
FOXQ1 Fork_head 6 / 14
HES1 bHLH 5 / 14
KLF3 zf-C2H2 6 / 14
MAFK TF_bZIP 14 / 14
NR4A2 NGFIB-like 11 / 14

All CRCs of SNU719
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CRC rank TF list of CRCs CRC score TF number of CRC Detail of CRC

Frequency of TFs that appear in CRCs
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TF name Frequency of TFs TF family Ensembl ID
MAFK 14 / 14 TF_bZIP ENSG00000198517
NR4A2 11 / 14 NGFIB-like ENSG00000153234
ASCL2 6 / 14 bHLH ENSG00000183734
FOXQ1 6 / 14 Fork_head ENSG00000164379
KLF3 6 / 14 zf-C2H2 ENSG00000109787
HES1 5 / 14 bHLH ENSG00000114315
BHLHE40 4 / 14 bHLH ENSG00000134107
MYB 4 / 14 MYB ENSG00000118513
MYC 4 / 14 bHLH ENSG00000136997
FOSL2 3 / 14 TF_bZIP ENSG00000075426
MNT 3 / 14 bHLH ENSG00000070444
ZNF217 3 / 14 zf-C2H2 ENSG00000171940

Indegree and outdegree of TFs
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TF name Indegree Outdegree Node connections
ZNF217 16 15 31
MAFK 16 26 42
MNT 15 14 29
ASCL2 12 25 37
KLF3 13 20 33
FOSL2 15 23 38
MYC 14 22 36
MYB 11 25 36
FOXQ1 14 20 34
NR4A2 15 24 39
BHLHE40 12 23 35
HES1 15 15 30

Expression of TFs in all CRCs