Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_007 | Other | Cervical | cervical-cancer_vector | 0.37748344370861 |
Sample_02_114 | Cell line | Mammary Gland | CAL51 | 0.19095477386935 |
Sample_02_180 | Cell line | Human melanoma | CJM | 0.4609375 |
Sample_02_181 | Cell line | Human melanoma | COLO679 | 0.29546666666667 |
Sample_02_183 | Cell line | Skin | SKMEL2 | 0.46153846153846 |
Sample_02_184 | Cell line | Skin | SKMEL30 | 0.18006430868167 |
Sample_02_236 | Cell line | Colon | V206 | 0.60662525879917 |
Sample_02_237 | Cell line | Colon | V389 | 0.30531934474508 |
Sample_02_242 | Cell line | Colon | V481 | 0.30644747804909 |
Sample_02_359 | Cell line | Colon | Colo741 | 0.057228915662651 |
Sample_02_406 | Cell line | Mammary Gland | ZR-75-30_parental | 0.10144927536232 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_02_007 | Cervical | Other | cervical-cancer_vector |
Sample_02_183 | Skin | Cell line | SKMEL2 |
Sample_02_236 | Colon | Cell line | V206 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr1 | 47904182 | 47904182 | G | T | exonic | FOXD2 | synonymous | LUAD|1|543|0.00184 |
- | chr1 | 47904283 | 47904283 | G | A | exonic | FOXD2 | nonsynonymous | PRAD|1|499|0.00200 |
- | chr1 | 47905224 | 47905224 | G | A | exonic | FOXD2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,KIPAN|1|799|0.00125,KIRP|1|282|0.00355 |
- | chr1 | 47905272 | 47905272 | - | AAAGA | exonic | FOXD2 | frameshift | TGCT|1|155|0.00645 |
- | chr1 | 47904390 | 47904390 | C | T | exonic | FOXD2 | nonsynonymous | ESCA|1|185|0.00541 |
- | chr1 | 47904257 | 47904257 | G | C | exonic | FOXD2 | nonsynonymous | CESC|1|194|0.00515 |
- | chr1 | 47904538 | 47904538 | G | A | exonic | FOXD2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr1 | 47904552 | 47904552 | G | A | exonic | FOXD2 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr1 | 47904409 | 47904409 | G | A | exonic | FOXD2 | stopgain | BLCA|1|396|0.00253 |
- | chr1 | 47905268 | 47905268 | C | - | exonic | FOXD2 | frameshift | TGCT|1|155|0.00645 |
- | chr1 | 47904363 | 47904363 | G | C | exonic | FOXD2 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr1 | 47904668 | 47904668 | - | CGCAC | exonic | FOXD2 | frameshift | SARC|1|247|0.00405 |
- | chr1 | 47904295 | 47904295 | A | G | exonic | FOXD2 | nonsynonymous | THCA|2|504|0.00397 |
- | chr1 | 47904133 | 47904133 | - | A | exonic | FOXD2 | frameshift | BLCA|1|396|0.00253 |
- | chr1 | 47905188 | 47905188 | G | C | exonic | FOXD2 | nonsynonymous | KIPAN|1|799|0.00125,KIRP|1|282|0.00355 |
- | chr1 | 47904537 | 47904537 | C | T | exonic | FOXD2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr1 | 47904205 | 47904205 | T | C | exonic | FOXD2 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr1 | 47904233 | 47904233 | G | A | exonic | FOXD2 | synonymous | ACC|1|90|0.01111 |
- | chr1 | 47905229 | 47905229 | C | A | exonic | FOXD2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr1 | 47905020 | 47905020 | G | - | exonic | FOXD2 | frameshift | SKCM|1|368|0.00272 |
- | chr1 | 47904171 | 47904171 | C | T | exonic | FOXD2 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr1 | 47905271 | 47905271 | - | A | exonic | FOXD2 | frameshift | TGCT|1|155|0.00645 |
rs201282916 | chr1 | 47904305 | 47904305 | G | T | exonic | FOXD2 | nonsynonymous | PAAD|1|185|0.00541 |
- | chr1 | 47904507 | 47904507 | C | T | exonic | FOXD2 | nonsynonymous | PRAD|1|499|0.00200 |
- | chr1 | 47904362 | 47904362 | C | G | exonic | FOXD2 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr1 | 47904210 | 47904210 | C | G | exonic | FOXD2 | nonsynonymous | PRAD|1|499|0.00200 |
rs2405913 | chr1 | 47904909 | 47904909 | G | C | exonic | FOXD2 | nonsynonymous | ACC|3|90|0.03333 |
- | chr1 | 47904449 | 47904449 | C | T | exonic | FOXD2 | synonymous | CESC|1|194|0.00515 |
- | chr1 | 47905198 | 47905198 | C | T | exonic | FOXD2 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr1 | 47904276 | 47904276 | A | G | exonic | FOXD2 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr1 | 47905016 | 47905016 | C | T | exonic | FOXD2 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr1 | 47904970 | 47904970 | G | T | exonic | FOXD2 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr1 | 47904255 | 47904255 | T | C | exonic | FOXD2 | synonymous | LUSC|1|178|0.00562 |
rs78469326 | chr1 | 47904000 | 47904000 | G | A | exonic | FOXD2 | nonsynonymous | ACC|1|90|0.01111 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
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pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
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GO_term_name | GO_term_type | TF_name |
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