Sample ID: | Sample_02_359 |
Biosample type: | Cell line |
Tissue type: | Colon |
Biosample name: | Colo741 |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE73319 |
Cancer type: | Colorectal Cancer |
CRC number: | 332 |
TF number of all CRCs: | 38 |
TF list of all CRCs: | RARA, SMAD3, NR4A2, SP1, RUNX1, TFAP2A, TGIF1, TEAD1, RREB1, ETV4, SREBF1, SOX10, NR4A1, MEF2D, E2F3, SOX12, ZBTB7B, JUND, SOX6, FOXK1, HOXC4, NR2F2, ARID5B, JUNB, RARG, FOXF2, SP3, HOXC8, BHLHE41, NFE2L2, FOSL1, TBX2, FOXD2, ERF, SNAI2, MNT, ZNF217, IRF4 |
TF name | TF family | Frequency of TFs |
---|---|---|
FOXF2 | Fork_head | 39 / 332 |
NR4A2 | NGFIB-like | 235 / 332 |
RARA | THR-like | 294 / 332 |
RARG | THR-like | 51 / 332 |
RUNX1 | Runt | 180 / 332 |
SMAD3 | MH1 | 278 / 332 |
SP1 | zf-C2H2 | 211 / 332 |
TEAD1 | TEA | 139 / 332 |
TFAP2A | AP-2 | 162 / 332 |
TGIF1 | Homeobox | 153 / 332 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
RARA | 294 / 332 | THR-like | ENSG00000131759 |
SMAD3 | 278 / 332 | MH1 | ENSG00000166949 |
NR4A2 | 235 / 332 | NGFIB-like | ENSG00000153234 |
SP1 | 211 / 332 | zf-C2H2 | ENSG00000185591 |
RUNX1 | 180 / 332 | Runt | ENSG00000159216 |
TFAP2A | 162 / 332 | AP-2 | ENSG00000137203 |
TGIF1 | 153 / 332 | Homeobox | ENSG00000177426 |
TEAD1 | 139 / 332 | TEA | ENSG00000187079 |
RREB1 | 132 / 332 | zf-C2H2 | ENSG00000124782 |
ETV4 | 132 / 332 | ETS | ENSG00000175832 |
SREBF1 | 116 / 332 | bHLH | ENSG00000072310 |
SOX10 | 102 / 332 | HMG | ENSG00000100146 |
NR4A1 | 100 / 332 | NGFIB-like | ENSG00000123358 |
MEF2D | 87 / 332 | SRF | ENSG00000116604 |
E2F3 | 85 / 332 | E2F | ENSG00000112242 |
SOX12 | 83 / 332 | HMG | ENSG00000177732 |
ZBTB7B | 77 / 332 | ZBTB | ENSG00000160685 |
JUND | 72 / 332 | TF_bZIP | ENSG00000130522 |
SOX6 | 68 / 332 | HMG | ENSG00000110693 |
FOXK1 | 68 / 332 | Fork_head | ENSG00000164916 |
HOXC4 | 61 / 332 | Homeobox | ENSG00000198353 |
NR2F2 | 59 / 332 | RXR-like | ENSG00000185551 |
ARID5B | 58 / 332 | ARID | ENSG00000150347 |
JUNB | 56 / 332 | TF_bZIP | ENSG00000171223 |
RARG | 51 / 332 | THR-like | ENSG00000172819 |
FOXF2 | 39 / 332 | Fork_head | ENSG00000137273 |
SP3 | 38 / 332 | zf-C2H2 | ENSG00000172845 |
HOXC8 | 32 / 332 | Homeobox | ENSG00000037965 |
BHLHE41 | 28 / 332 | bHLH | ENSG00000123095 |
NFE2L2 | 27 / 332 | TF_bZIP | ENSG00000116044 |
FOSL1 | 22 / 332 | TF_bZIP | ENSG00000175592 |
TBX2 | 20 / 332 | T-box | ENSG00000121068 |
FOXD2 | 19 / 332 | Fork_head | ENSG00000186564 |
ERF | 18 / 332 | ETS | ENSG00000105722 |
SNAI2 | 17 / 332 | zf-C2H2 | ENSG00000019549 |
MNT | 5 / 332 | bHLH | ENSG00000070444 |
ZNF217 | 4 / 332 | zf-C2H2 | ENSG00000171940 |
IRF4 | 2 / 332 | IRF | ENSG00000137265 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
HOXC8 | 46 | 40 | 86 |
ZNF217 | 38 | 30 | 68 |
FOXK1 | 33 | 68 | 101 |
MNT | 47 | 25 | 72 |
JUNB | 51 | 50 | 101 |
JUND | 33 | 67 | 100 |
SMAD3 | 49 | 68 | 117 |
TBX2 | 36 | 51 | 87 |
ERF | 30 | 40 | 70 |
MEF2D | 43 | 59 | 102 |
TEAD1 | 45 | 59 | 104 |
RREB1 | 44 | 68 | 112 |
RARA | 52 | 71 | 123 |
RARG | 34 | 68 | 102 |
SOX10 | 40 | 66 | 106 |
SOX6 | 37 | 63 | 100 |
SOX12 | 39 | 69 | 108 |
NR2F2 | 43 | 55 | 98 |
RUNX1 | 44 | 73 | 117 |
BHLHE41 | 49 | 37 | 86 |
FOXF2 | 33 | 55 | 88 |
FOSL1 | 35 | 58 | 93 |
ARID5B | 51 | 36 | 87 |
ZBTB7B | 49 | 49 | 98 |
NR4A2 | 49 | 64 | 113 |
SP1 | 46 | 75 | 121 |
NR4A1 | 52 | 53 | 105 |
FOXD2 | 25 | 61 | 86 |
HOXC4 | 46 | 45 | 91 |
SP3 | 28 | 68 | 96 |
SNAI2 | 41 | 46 | 87 |
E2F3 | 39 | 64 | 103 |
ETV4 | 44 | 59 | 103 |
IRF4 | 7 | 58 | 65 |
TFAP2A | 42 | 74 | 116 |
SREBF1 | 48 | 55 | 103 |
NFE2L2 | 37 | 59 | 96 |
TGIF1 | 52 | 57 | 109 |