Sample ID: | Sample_02_182 |
Biosample type: | Cell line |
Tissue type: | Human melanoma |
Biosample name: | LOX-IMVI |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE75352 |
Cancer type: | melanoma |
CRC number: | 348 |
TF number of all CRCs: | 39 |
TF list of all CRCs: | NFATC2, ETS1, SMAD3, JUND, TGIF1, JUNB, KLF7, RUNX1, SREBF1, TFAP2A, RUNX2, RARG, FOSL2, TEAD1, SNAI2, BHLHE40, SOX4, MEF2D, KLF16, NR2F2, HOXC4, ETV6, PRDM1, HOXB5, MYC, FOSL1, HOXC8, SOX9, NFIB, PAX3, RARB, SOX5, ZNF217, RFX3, CREB1, ERF, HOXB6, ELK3, MNT |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
NFATC2 | 285 / 348 | RHD | ENSG00000101096 |
ETS1 | 279 / 348 | ETS | ENSG00000134954 |
SMAD3 | 241 / 348 | MH1 | ENSG00000166949 |
JUND | 226 / 348 | TF_bZIP | ENSG00000130522 |
TGIF1 | 176 / 348 | Homeobox | ENSG00000177426 |
JUNB | 176 / 348 | TF_bZIP | ENSG00000171223 |
KLF7 | 154 / 348 | zf-C2H2 | ENSG00000118263 |
RUNX1 | 147 / 348 | Runt | ENSG00000159216 |
SREBF1 | 119 / 348 | bHLH | ENSG00000072310 |
TFAP2A | 107 / 348 | AP-2 | ENSG00000137203 |
RUNX2 | 106 / 348 | Runt | ENSG00000124813 |
RARG | 103 / 348 | THR-like | ENSG00000172819 |
FOSL2 | 92 / 348 | TF_bZIP | ENSG00000075426 |
TEAD1 | 88 / 348 | TEA | ENSG00000187079 |
SNAI2 | 84 / 348 | zf-C2H2 | ENSG00000019549 |
BHLHE40 | 82 / 348 | bHLH | ENSG00000134107 |
SOX4 | 75 / 348 | HMG | ENSG00000124766 |
MEF2D | 67 / 348 | SRF | ENSG00000116604 |
KLF16 | 64 / 348 | zf-C2H2 | ENSG00000129911 |
NR2F2 | 53 / 348 | RXR-like | ENSG00000185551 |
HOXC4 | 48 / 348 | Homeobox | ENSG00000198353 |
PRDM1 | 44 / 348 | zf-C2H2 | ENSG00000057657 |
ETV6 | 44 / 348 | ETS | ENSG00000139083 |
HOXB5 | 43 / 348 | Homeobox | ENSG00000120075 |
MYC | 38 / 348 | bHLH | ENSG00000136997 |
FOSL1 | 37 / 348 | TF_bZIP | ENSG00000175592 |
SOX9 | 36 / 348 | HMG | ENSG00000125398 |
HOXC8 | 36 / 348 | Homeobox | ENSG00000037965 |
NFIB | 31 / 348 | CTF/NFI | ENSG00000147862 |
PAX3 | 28 / 348 | PAX | ENSG00000135903 |
RARB | 27 / 348 | THR-like | ENSG00000077092 |
SOX5 | 26 / 348 | HMG | ENSG00000134532 |
RFX3 | 24 / 348 | RFX | ENSG00000080298 |
ZNF217 | 24 / 348 | zf-C2H2 | ENSG00000171940 |
CREB1 | 16 / 348 | TF_bZIP | ENSG00000118260 |
ERF | 15 / 348 | ETS | ENSG00000105722 |
HOXB6 | 7 / 348 | Homeobox | ENSG00000108511 |
ELK3 | 6 / 348 | ETS | ENSG00000111145 |
MNT | 5 / 348 | bHLH | ENSG00000070444 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
RARB | 41 | 67 | 108 |
RARG | 47 | 74 | 121 |
BHLHE40 | 48 | 52 | 100 |
ETS1 | 53 | 69 | 122 |
MYC | 51 | 51 | 102 |
CREB1 | 22 | 53 | 75 |
SNAI2 | 54 | 43 | 97 |
RFX3 | 37 | 55 | 92 |
RUNX2 | 44 | 66 | 110 |
ELK3 | 32 | 33 | 65 |
RUNX1 | 47 | 79 | 126 |
HOXC8 | 42 | 41 | 83 |
NFATC2 | 54 | 68 | 122 |
HOXC4 | 42 | 41 | 83 |
MNT | 52 | 30 | 82 |
HOXB6 | 29 | 38 | 67 |
HOXB5 | 43 | 41 | 84 |
PAX3 | 46 | 36 | 82 |
ETV6 | 31 | 58 | 89 |
PRDM1 | 31 | 76 | 107 |
MEF2D | 42 | 62 | 104 |
ZNF217 | 52 | 37 | 89 |
SMAD3 | 54 | 69 | 123 |
NR2F2 | 48 | 53 | 101 |
FOSL1 | 29 | 71 | 100 |
FOSL2 | 51 | 59 | 110 |
SREBF1 | 49 | 58 | 107 |
JUNB | 48 | 67 | 115 |
JUND | 49 | 76 | 125 |
ERF | 50 | 32 | 82 |
SOX9 | 31 | 79 | 110 |
TEAD1 | 42 | 73 | 115 |
SOX4 | 42 | 71 | 113 |
SOX5 | 26 | 71 | 97 |
KLF16 | 42 | 63 | 105 |
TFAP2A | 39 | 75 | 114 |
KLF7 | 50 | 61 | 111 |
NFIB | 48 | 39 | 87 |
TGIF1 | 52 | 60 | 112 |