Cancer CRCdb

TF information

TF name:	RARB
TF family:	THR-like
Ensembl gene ID:	ENSG00000077092
Ensembl protein ID:	ENSP00000332296, ENSP00000373282, ENSP00000391391, ENSP00000398840
Entrez gene ID:	5915

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

Frequency of RARB in all biosamples

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Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_182	Cell line	Human melanoma	LOX-IMVI	0.077586206896552
Sample_02_228	Cell line	Oesophagus	KYSE510	0.30009319664492
Sample_02_268	Cell line	Kidney	A-498	0.31124238508399

RARB distribution in samples’ most representative CRC

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Sample ID	Tissue type	Biosample type	Biosample name
Sample_02_268	Kidney	Cell line	A-498

RARB distribution in all CRCs

Genomic distribution of SEs associated with RARB

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Mutation of RARB

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Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of RARB

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr3	25611395	25611395	G	T	exonic	RARB	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr3	25502813	25502813	G	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25637915	25637915	A	T	exonic	RARB	synonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
-	chr3	25611301	25611301	C	T	exonic	RARB	synonymous	HNSC\|1\|512\|0.00195
-	chr3	25216053	25216053	C	-	exonic	RARB	frameshift	BLCA\|1\|396\|0.00253
-	chr3	25611338	25611338	C	T	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25622124	25622124	G	A	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25502710	25502710	G	C	exonic	RARB	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr3	25611305	25611305	G	A	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr3	25215958	25215958	C	A	exonic	RARB	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr3	25636129	25636129	C	G	exonic	RARB	nonsynonymous	SARC\|1\|247\|0.00405
-	chr3	25637964	25637964	C	G	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr3	25502825	25502825	G	A	exonic	RARB	nonsynonymous	TGCT\|1\|155\|0.00645
rs761412606	chr3	25611289	25611289	G	A	exonic	RARB	synonymous	DLBC\|1\|48\|0.02083
-	chr3	25470112	25470112	A	T	UTR5	RARB	unknown	BLCA\|1\|396\|0.00253
-	chr3	25635012	25635012	A	C	exonic	RARB	synonymous	UCEC\|1\|248\|0.00403
-	chr3	25502764	25502764	C	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
rs756703369	chr3	25215977	25215977	C	T	exonic	RARB	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr3	25542729	25542729	G	C	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr3	25502759	25502759	A	G	exonic	RARB	nonsynonymous	ESCA\|2\|185\|0.01081
-	chr3	25636077	25636077	A	C	exonic	RARB	nonsynonymous	CESC\|1\|194\|0.00515
-	chr3	25502774	25502774	T	C	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25637940	25637940	G	A	exonic	RARB	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr3	25502708	25502708	C	A	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr3	25502755	25502755	G	A	exonic	RARB	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr3	25622072	25622072	G	A	exonic	RARB	synonymous	BRCA\|1\|982\|0.00102
-	chr3	25542811	25542811	G	T	exonic	RARB	stopgain	BRCA\|1\|982\|0.00102
-	chr3	25502712	25502712	G	T	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs78062701	chr3	25622140	25622140	G	A	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25611305	25611305	G	T	exonic	RARB	stopgain	KIPAN\|2\|799\|0.00250,KIRC\|2\|451\|0.00443
-	chr3	25611346	25611346	G	A	exonic	RARB	synonymous	UCEC\|1\|248\|0.00403
-	chr3	25634998	25634998	T	G	exonic	RARB	nonsynonymous	HNSC\|1\|512\|0.00195
rs765012086	chr3	25635198	25635198	G	A	exonic	RARB	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr3	25635018	25635018	A	G	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25215902	25215902	G	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25542770	25542770	A	C	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25542705	25542705	G	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25542696	25542696	G	T	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25637920	25637920	G	C	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25542757	25542757	A	G	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25622137	25622137	A	T	exonic	RARB	nonsynonymous	HNSC\|1\|512\|0.00195,SKCM\|1\|368\|0.00272
-	chr3	25637964	25637964	C	T	exonic	RARB	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr3	25636062	25636062	T	A	exonic	RARB	stopgain	SKCM\|1\|368\|0.00272
-	chr3	25502731	25502731	C	T	exonic	RARB	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr3	25542761	25542761	G	A	exonic	RARB	nonsynonymous	UCEC\|1\|248\|0.00403
rs767064867	chr3	25216031	25216031	C	T	exonic	RARB	nonsynonymous	SKCM\|2\|368\|0.00543
rs372148180	chr3	25611288	25611288	C	T	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253,COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr3	25636158	25636158	T	C	exonic	RARB	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
-	chr3	25635052	25635052	G	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25542760	25542760	C	T	exonic	RARB	stopgain	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25502735	25502735	C	A	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25635067	25635067	G	A	exonic	RARB	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr3	25637960	25637960	A	G	exonic	RARB	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25611354	25611354	G	A	exonic	RARB	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr3	25502726	25502726	-	C	exonic	RARB	frameshift	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25611284	25611284	A	T	exonic	RARB	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr3	25502769	25502769	C	A	exonic	RARB	stopgain	OV\|1\|469\|0.00213
-	chr3	25622195	25622195	C	A	exonic	RARB	synonymous	LUAD\|1\|543\|0.00184
-	chr3	25611373	25611373	T	G	exonic	RARB	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25636025	25636025	G	C	exonic	RARB	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr3	25622154	25622154	A	G	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25542676	25542676	T	C	exonic	RARB	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr3	25637933	25637933	G	C	exonic	RARB	nonsynonymous	CESC\|1\|194\|0.00515
-	chr3	25611292	25611292	G	A	exonic	RARB	synonymous	LUAD\|1\|543\|0.00184
-	chr3	25502784	25502784	C	A	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25572914	25572914	-	TAGATCGA	intronic	RARB	unknown	-
-	chr3	25470331	25470331	T	G	exonic	RARB	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr3	25635088	25635088	G	T	exonic	RARB	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr3	25622051	25622051	C	A	exonic	RARB	nonsynonymous	SARC\|1\|247\|0.00405
-	chr3	25636123	25636123	A	G	exonic	RARB	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr3	25636104	25636104	G	-	exonic	RARB	frameshift	CESC\|1\|194\|0.00515
-	chr3	25637931	25637931	T	C	exonic	RARB	synonymous	BLCA\|1\|396\|0.00253
-	chr3	25470238	25470238	G	A	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25636097	25636097	C	T	exonic	RARB	stopgain	COAD\|2\|367\|0.00545,COADREAD\|2\|489\|0.00409
-	chr3	25215976	25215976	C	G	exonic	RARB	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr3	25502747	25502747	C	G	exonic	RARB	nonsynonymous	SARC\|1\|247\|0.00405
-	chr3	25638069	25638069	G	C	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr3	25215993	25215993	A	T	exonic	RARB	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs748638067	chr3	25215907	25215907	G	A	exonic	RARB	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr3	25542765	25542765	C	A	exonic	RARB	stopgain	BRCA\|1\|982\|0.00102
-	chr3	25622184	25622184	C	T	exonic	RARB	synonymous	OV\|1\|469\|0.00213
rs114613844	chr3	25635173	25635173	C	G	exonic	RARB	synonymous	SKCM\|1\|368\|0.00272
-	chr3	25542800	25542800	G	A	exonic	RARB	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr3	25542806	25542806	C	T	exonic	RARB	nonsynonymous	CESC\|1\|194\|0.00515
-	chr3	25502818	25502818	T	A	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25611335	25611335	G	A	exonic	RARB	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr3	25502706	25502706	C	A	exonic	RARB	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr3	25470259	25470259	G	T	exonic	RARB	nonsynonymous	BLCA\|1\|396\|0.00253
rs750523929	chr3	25216047	25216047	C	T	exonic	RARB	synonymous	ESCA\|1\|185\|0.00541
-	chr3	25542753	25542753	C	T	exonic	RARB	synonymous	LUAD\|1\|543\|0.00184
-	chr3	25215943	25215943	C	T	exonic	RARB	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr3	25542766	25542766	C	G	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25635064	25635065	AT	-	exonic	RARB	frameshift	HNSC\|1\|512\|0.00195
-	chr3	25622051	25622051	C	T	exonic	RARB	synonymous	SARC\|1\|247\|0.00405
-	chr3	25470351	25470351	C	T	exonic	RARB	synonymous	BRCA\|1\|982\|0.00102
-	chr3	25622090	25622090	C	T	exonic	RARB	synonymous	BRCA\|1\|982\|0.00102
rs372338731	chr3	25502773	25502773	G	A	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25542804	25542804	G	T	exonic	RARB	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr3	25636010	25636010	G	A	splicing	RARB	splicing	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25622075	25622075	C	G	exonic	RARB	synonymous	LUAD\|1\|543\|0.00184
-	chr3	25638038	25638038	G	A	exonic	RARB	synonymous	UCEC\|1\|248\|0.00403
-	chr3	25636113	25636113	A	G	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25470337	25470337	G	-	exonic	RARB	frameshift	LIHC\|1\|373\|0.00268
-	chr3	25637962	25637962	C	A	exonic	RARB	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr3	25622157	25622157	G	T	exonic	RARB	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr3	25542705	25542705	G	C	exonic	RARB	nonsynonymous	CESC\|1\|194\|0.00515
-	chr3	25637918	25637918	G	A	exonic	RARB	synonymous	UCEC\|1\|248\|0.00403
-	chr3	25622055	25622055	C	T	exonic	RARB	stopgain	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25622057	25622057	A	T	exonic	RARB	synonymous	BRCA\|1\|982\|0.00102
rs773216330	chr3	25622169	25622169	G	A	exonic	RARB	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr3	25635154	25635154	A	G	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25470290	25470290	C	T	exonic	RARB	nonsynonymous	PRAD\|1\|499\|0.00200
rs762241586	chr3	25470284	25470284	C	T	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr3	25470335	25470335	G	A	exonic	RARB	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
rs768498439	chr3	25470378	25470378	A	G	exonic	RARB	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr3	25502752	25502752	C	T	exonic	RARB	stopgain	UCEC\|1\|248\|0.00403
-	chr3	25502692	25502692	A	G	exonic	RARB	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr3	25611300	25611300	G	A	exonic	RARB	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr3	25611286	25611286	T	G	exonic	RARB	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs374139996	chr3	25216038	25216038	G	A	exonic	RARB	synonymous	SKCM\|1\|368\|0.00272
rs759614000	chr3	25636151	25636151	C	T	exonic	RARB	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253

Disease information of RARB

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TF_name	Disease_name	Disease_class	Disease_semantic_type	TF_disease_source
RARB	Adenocarcinoma	C04	Neoplastic Process	CTD_human
RARB	Malignant neoplasm of breast	C04;C17	Neoplastic Process	CTD_human
RARB	Squamous cell carcinoma	C04	Neoplastic Process	CTD_human
RARB	Uterine Cervical Neoplasm	C04;C13	Neoplastic Process	CTD_human
RARB	Congenital ocular coloboma (disorder)	C11;C16	Congenital Abnormality	GENOMICS_ENGLAND
RARB	Endometriosis	C13	Disease or Syndrome	CTD_human
RARB	Head and Neck Neoplasms	C04	Neoplastic Process	CTD_human
RARB	Head Neoplasms	C04	Neoplastic Process	CTD_human
RARB	Lung Neoplasms	C04;C08	Neoplastic Process	CTD_human
RARB	Malignant neoplasm of stomach	C04;C06	Neoplastic Process	CTD_human
RARB	Neck Neoplasms	C04	Neoplastic Process	CTD_human
RARB	Stomach Neoplasms	C04;C06	Neoplastic Process	CTD_human
RARB	Sciatic Neuropathy	C10	Disease or Syndrome	CTD_human
RARB	Lesion of Sciatic Nerve	C10	Disease or Syndrome	CTD_human
RARB	Adenocarcinoma, Basal Cell	C04	Neoplastic Process	CTD_human
RARB	Adenocarcinoma, Oxyphilic	C04	Neoplastic Process	CTD_human
RARB	Carcinoma, Cribriform	C04	Neoplastic Process	CTD_human
RARB	Carcinoma, Granular Cell	C04	Neoplastic Process	CTD_human
RARB	Adenocarcinoma, Tubular	C04	Neoplastic Process	CTD_human
RARB	Sciatic Neuritis	C10	Disease or Syndrome	CTD_human
RARB	Malignant neoplasm of lung	C04;C08	Neoplastic Process	CTD_human
RARB	Endometrioma	C13	Neoplastic Process	CTD_human
RARB	Malignant Head and Neck Neoplasm	C04	Neoplastic Process	CTD_human
RARB	Breast Carcinoma	C04;C17	Neoplastic Process	CTD_human
RARB	Cancer of Neck	C04	Neoplastic Process	CTD_human
RARB	Cancer of Head	C04	Neoplastic Process	CTD_human
RARB	Neuralgia-Neuritis, Sciatic Nerve	C10	Disease or Syndrome	CTD_human
RARB	Sciatic Nerve Palsy	C10	Disease or Syndrome	CTD_human
RARB	Upper Aerodigestive Tract Neoplasms	C04	Neoplastic Process	CTD_human
RARB	Mammary Neoplasms, Human	C04;C17	Neoplastic Process	CTD_human
RARB	Mammary Neoplasms	C04;C17	Neoplastic Process	CTD_human
RARB	Colorectal Cancer	C04;C06	Neoplastic Process	UNIPROT
RARB	Hereditary Diffuse Gastric Cancer	C04;C06	Neoplastic Process	CTD_human
RARB	ANOPHTHALMIA AND PULMONARY HYPOPLASIA	C08;C11;C16	Disease or Syndrome	ORPHANET
RARB	Intellectual Disability	C10;C23;F01;F03	Mental or Behavioral Dysfunction	GENOMICS_ENGLAND
RARB	MICROPHTHALMIA, SYNDROMIC 12		Disease or Syndrome	CTD_human;UNIPROT
RARB	cervical cancer	C04;C13	Neoplastic Process	CTD_human

Pathway associated with RARB

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pathway_ID	pathway_name	pathway_source	gene_number	edge_number
pathway0001534	Nuclear Receptor transcription pathway	reactome	51	284
pathway0001883	Retinoic acid receptors-mediated signaling	pid	30	235
pathway0001947	RXR and RAR heterodimerization with other nuclear receptor	pid	26	164
pathway0002028	Signaling by Retinoic Acid	reactome	20	78
pathway0002669	Small cell lung cancer	kegg	83	807
pathway0002670	Non-small cell lung cancer	kegg	54	623

Go term information of RARB

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GO_term_name	GO_term_type	TF_name
GO_CARDIAC_CHAMBER_DEVELOPMENT	BP	RARB
GO_OUTFLOW_TRACT_SEPTUM_MORPHOGENESIS	BP	RARB
GO_CARTILAGE_DEVELOPMENT	BP	RARB
GO_REGULATION_OF_CARTILAGE_DEVELOPMENT	BP	RARB
GO_HINDLIMB_MORPHOGENESIS	BP	RARB
GO_VENTRICULAR_CARDIAC_MUSCLE_CELL_DIFFERENTIATION	BP	RARB
GO_REGULATION_OF_MYELINATION	BP	RARB
GO_BONE_GROWTH	BP	RARB
GO_GLANDULAR_EPITHELIAL_CELL_DEVELOPMENT	BP	RARB
GO_EMBRYONIC_DIGESTIVE_TRACT_DEVELOPMENT	BP	RARB
GO_HEART_MORPHOGENESIS	BP	RARB
GO_REGULATION_OF_CHONDROCYTE_DIFFERENTIATION	BP	RARB
GO_EMBRYONIC_HINDLIMB_MORPHOGENESIS	BP	RARB
GO_NEGATIVE_REGULATION_OF_CARTILAGE_DEVELOPMENT	BP	RARB
GO_TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER	BP	RARB
GO_NEUROGENESIS	BP	RARB
GO_COLUMNAR_CUBOIDAL_EPITHELIAL_CELL_DEVELOPMENT	BP	RARB
GO_CARTILAGE_DEVELOPMENT_INVOLVED_IN_ENDOCHONDRAL_BONE_MORPHOGENESIS	BP	RARB
GO_INTRACELLULAR_RECEPTOR_SIGNALING_PATHWAY	BP	RARB
GO_UROGENITAL_SYSTEM_DEVELOPMENT	BP	RARB
GO_EMBRYONIC_EYE_MORPHOGENESIS	BP	RARB
GO_OUTFLOW_TRACT_MORPHOGENESIS	BP	RARB
GO_STRIATUM_DEVELOPMENT	BP	RARB
GO_POSITIVE_REGULATION_OF_CELL_DEVELOPMENT	BP	RARB
GO_ENDOCHONDRAL_BONE_MORPHOGENESIS	BP	RARB
GO_CARDIAC_SEPTUM_MORPHOGENESIS	BP	RARB
GO_RETINA_DEVELOPMENT_IN_CAMERA_TYPE_EYE	BP	RARB
GO_CELL_DEVELOPMENT	BP	RARB
GO_GROWTH_PLATE_CARTILAGE_DEVELOPMENT	BP	RARB
GO_EMBRYONIC_ORGAN_DEVELOPMENT	BP	RARB
GO_SUBPALLIUM_DEVELOPMENT	BP	RARB
GO_RETINOIC_ACID_RECEPTOR_SIGNALING_PATHWAY	BP	RARB
GO_NEGATIVE_REGULATION_OF_CHONDROCYTE_DIFFERENTIATION	BP	RARB
GO_GLANDULAR_EPITHELIAL_CELL_DIFFERENTIATION	BP	RARB
GO_TRANSCRIPTION_FACTOR_ACTIVITY_DIRECT_LIGAND_REGULATED_SEQUENCE_SPECIFIC_DNA_BINDING	MF	RARB
GO_STEROID_HORMONE_RECEPTOR_ACTIVITY	MF	RARB
GO_RETINOIC_ACID_RECEPTOR_BINDING	MF	RARB
GO_RETINOID_X_RECEPTOR_BINDING	MF	RARB

Survival analysis of RARB

Methods

Overall Survival

Disease Free Survival (RFS)

Group Cutoff

Median

Quartile

Custom

Cutoff-High(%)

Hazards Ratio (HR) Calculate the hazards ratio based on Cox PH Model.

95% Confidence Interval Add the 95% CI as dotted line.

Axis Units

Expression of RARB

Pan cancer (TCGA) Cell line (ENCODE) In vitro differentiated cell (ENCODE) Primary cell (ENCODE) Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)