TF information

TF name: HOXB6
TF family: Homeobox
Ensembl gene ID: ENSG00000108511
Ensembl protein ID: ENSP00000420009, ENSP00000225648
Entrez gene ID: 3216
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of HOXB6 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_007OtherCervicalcervical-cancer_vector0.14238410596026
Sample_02_021Cell lineColonV4290.093686941481695
Sample_02_182Cell lineHuman melanomaLOX-IMVI0.020114942528736
Sample_02_242Cell lineColonV4810.061622764852913
Sample_02_355Cell lineColonHCT150.20238095238095
Sample_02_356Cell lineColonSw4800.28387096774194
Sample_02_358Cell lineColonLS1800.24091627172196
Sample_02_395Cell lineMammary GlandBT-5490.031608391608392
Sample_02_424Cell lineColonSW6200.28985507246377

HOXB6 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name

HOXB6 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with HOXB6
Download

Mutation of HOXB6
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of HOXB6

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr174667527346675273GAexonicHOXB6synonymous SARC|1|247|0.00405
-chr174667386246673862GAexonicHOXB6synonymous BLCA|1|396|0.00253
-chr174667389246673892CTexonicHOXB6synonymous SKCM|1|368|0.00272
-chr174667389146673891CAexonicHOXB6stopgain SKCM|1|368|0.00272
-chr174667384846673848CTexonicHOXB6stopgain HNSC|1|512|0.00195
rs141275290chr174667383846673838CTexonicHOXB6synonymous SKCM|1|368|0.00272
-chr174667391846673918CTexonicHOXB6nonsynonymous SKCM|1|368|0.00272
-chr174667524146675241GAexonicHOXB6nonsynonymous BLCA|1|396|0.00253
-chr174667519446675194CAexonicHOXB6nonsynonymous LUAD|1|543|0.00184
-chr174667550646675506ATexonicHOXB6nonsynonymous LIHC|1|373|0.00268
-chr174667516446675164CTexonicHOXB6nonsynonymous BLCA|1|396|0.00253
-chr174667384946673849ACexonicHOXB6nonsynonymous BRCA|1|982|0.00102
-chr174667382146673821GAexonicHOXB6nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
-chr174667381646673816GAexonicHOXB6stopgain HNSC|1|512|0.00195
-chr174667547646675476TGexonicHOXB6nonsynonymous BLCA|1|396|0.00253
-chr174667380446673804CTexonicHOXB6nonsynonymous BLCA|1|396|0.00253,STAD|1|395|0.00253,STES|1|395|0.00253
-chr174667402246674022CAexonicHOXB6nonsynonymous LUAD|1|543|0.00184
-chr174667400746674007CAexonicHOXB6nonsynonymous LUAD|1|543|0.00184
-chr174667400246674002GAexonicHOXB6nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr174667382046673820CAexonicHOXB6synonymous LUAD|1|543|0.00184
-chr174667396346673963TCexonicHOXB6nonsynonymous LIHC|1|373|0.00268
-chr174667402846674028GAexonicHOXB6nonsynonymous CESC|1|194|0.00515
rs577327660chr174667527646675276GAexonicHOXB6synonymous LIHC|1|373|0.00268
-chr174667391146673911GAexonicHOXB6nonsynonymous COADREAD|1|489|0.00204,READ|1|122|0.00820
-chr174667378746673787T-exonicHOXB6frameshift COAD|2|367|0.00545,COADREAD|2|489|0.00409
-chr174667403146674031GAexonicHOXB6nonsynonymous HNSC|1|512|0.00195
-chr174667379646673796CTexonicHOXB6synonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr174667400746674007CTexonicHOXB6nonsynonymous BLCA|1|396|0.00253
-chr174667392346673923CAexonicHOXB6nonsynonymous LUSC|1|178|0.00562
-chr174667390346673903G-exonicHOXB6frameshift LUAD|1|543|0.00184

Disease information of HOXB6
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source

Pathway associated with HOXB6
pathway_ID pathway_name pathway_source gene_number edge_number

Go term information of HOXB6
GO_term_name GO_term_type TF_name
GO_MYELOID_CELL_HOMEOSTASIS BP HOXB6
GO_EMBRYONIC_SKELETAL_SYSTEM_MORPHOGENESIS BP HOXB6
GO_ERYTHROCYTE_HOMEOSTASIS BP HOXB6

Survival analysis of HOXB6



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of HOXB6