Sample ID: | Sample_02_311 |
Biosample type: | Cell line |
Tissue type: | Neuroblastoma |
Biosample name: | SK-N-AS |
Data source: | NCBI GEO/SRA |
GSE ID: | GSE90683 |
Cancer type: | Neuroblastoma |
CRC number: | 77 |
TF number of all CRCs: | 27 |
TF list of all CRCs: | HOXD9, PBX1, RARA, PHOX2B, JUNB, GATA3, MEIS1, CREB1, ESRRG, MEF2D, HOXD8, NR2F1, SMAD3, GATA2, TBX2, KLF7, E2F2, TEAD1, MEIS2, PROX1, ETS2, ZNF217, TCF4, PRRX1, ETV1, HLX, NFIB |
TF name | TF family | Frequency of TFs |
---|---|---|
CREB1 | TF_bZIP | 43 / 77 |
ESRRG | ESR-like | 41 / 77 |
ETS2 | ETS | 14 / 77 |
GATA3 | zf-GATA | 50 / 77 |
HOXD8 | Homeobox | 39 / 77 |
HOXD9 | Homeobox | 60 / 77 |
JUNB | TF_bZIP | 53 / 77 |
MEF2D | SRF | 41 / 77 |
MEIS1 | Homeobox | 48 / 77 |
PBX1 | Homeobox | 60 / 77 |
PHOX2B | Homeobox | 55 / 77 |
RARA | THR-like | 59 / 77 |
CRC rank | TF list of CRCs | CRC score | TF number of CRC | Detail of CRC |
---|
TF name | Frequency of TFs | TF family | Ensembl ID |
---|---|---|---|
HOXD9 | 60 / 77 | Homeobox | ENSG00000128709 |
PBX1 | 60 / 77 | Homeobox | ENSG00000185630 |
RARA | 59 / 77 | THR-like | ENSG00000131759 |
PHOX2B | 55 / 77 | Homeobox | ENSG00000109132 |
JUNB | 53 / 77 | TF_bZIP | ENSG00000171223 |
GATA3 | 50 / 77 | zf-GATA | ENSG00000107485 |
MEIS1 | 48 / 77 | Homeobox | ENSG00000143995 |
CREB1 | 43 / 77 | TF_bZIP | ENSG00000118260 |
ESRRG | 41 / 77 | ESR-like | ENSG00000196482 |
MEF2D | 41 / 77 | SRF | ENSG00000116604 |
HOXD8 | 39 / 77 | Homeobox | ENSG00000175879 |
NR2F1 | 36 / 77 | RXR-like | ENSG00000175745 |
SMAD3 | 35 / 77 | MH1 | ENSG00000166949 |
GATA2 | 26 / 77 | zf-GATA | ENSG00000179348 |
TBX2 | 22 / 77 | T-box | ENSG00000121068 |
KLF7 | 22 / 77 | zf-C2H2 | ENSG00000118263 |
E2F2 | 21 / 77 | E2F | ENSG00000007968 |
TEAD1 | 19 / 77 | TEA | ENSG00000187079 |
MEIS2 | 18 / 77 | Homeobox | ENSG00000134138 |
PROX1 | 16 / 77 | HPD | ENSG00000117707 |
ETS2 | 14 / 77 | ETS | ENSG00000157557 |
ZNF217 | 12 / 77 | zf-C2H2 | ENSG00000171940 |
TCF4 | 10 / 77 | bHLH | ENSG00000196628 |
PRRX1 | 4 / 77 | Homeobox | ENSG00000116132 |
ETV1 | 2 / 77 | NA | NA |
HLX | 1 / 77 | Homeobox | ENSG00000136630 |
NFIB | 1 / 77 | CTF/NFI | ENSG00000147862 |
TF name | Indegree | Outdegree | Node connections |
---|---|---|---|
ZNF217 | 28 | 25 | 53 |
TCF4 | 34 | 28 | 62 |
JUNB | 34 | 38 | 72 |
SMAD3 | 30 | 45 | 75 |
TBX2 | 28 | 36 | 64 |
TEAD1 | 25 | 38 | 63 |
RARA | 33 | 43 | 76 |
ETS2 | 31 | 25 | 56 |
PHOX2B | 33 | 41 | 74 |
NR2F1 | 26 | 40 | 66 |
MEIS2 | 25 | 42 | 67 |
MEIS1 | 29 | 42 | 71 |
PROX1 | 31 | 21 | 52 |
KLF7 | 27 | 40 | 67 |
ETV1 | 18 | 26 | 44 |
ESRRG | 25 | 42 | 67 |
HOXD8 | 31 | 41 | 72 |
HOXD9 | 31 | 46 | 77 |
CREB1 | 31 | 33 | 64 |
GATA2 | 33 | 32 | 65 |
GATA3 | 31 | 42 | 73 |
PBX1 | 31 | 41 | 72 |
NFIB | 6 | 30 | 36 |
E2F2 | 24 | 39 | 63 |
HLX | 10 | 38 | 48 |
MEF2D | 32 | 39 | 71 |
PRRX1 | 14 | 39 | 53 |