Sample overview of SNU1750

Sample ID: Sample_02_197
Biosample type: Cell line
Tissue type: Stomach
Biosample name: SNU1750
Data source: NCBI GEO/SRA
GSE ID: GSE75898
Cancer type: Gastric Cancer
CRC number: 9
TF number of all CRCs: 10
TF list of all CRCs: CDX2, SMAD3, RARG, FOSL2, FOXQ1, MSX2, SOX4, MEF2D, BACH2, POU2F1

The most representative CRC of SNU1750
Download
Relationship plot of CRC model
TF number of this CRC: 3
CRC socre: 4.333333
TF list of the most representative CRC
TF name TF family Frequency of TFs
CDX2 Homeobox 5 / 9
RARG THR-like 4 / 9
SMAD3 MH1 4 / 9

All CRCs of SNU1750
Download
CRC rank TF list of CRCs CRC score TF number of CRC Detail of CRC

Frequency of TFs that appear in CRCs
Download

TF name Frequency of TFs TF family Ensembl ID
CDX2 5 / 9 Homeobox ENSG00000165556
FOSL2 4 / 9 TF_bZIP ENSG00000075426
RARG 4 / 9 THR-like ENSG00000172819
SMAD3 4 / 9 MH1 ENSG00000166949
FOXQ1 3 / 9 Fork_head ENSG00000164379
MEF2D 2 / 9 SRF ENSG00000116604
MSX2 2 / 9 Homeobox ENSG00000120149
SOX4 2 / 9 HMG ENSG00000124766
BACH2 1 / 9 TF_bZIP ENSG00000112182
POU2F1 1 / 9 Pou ENSG00000143190

Indegree and outdegree of TFs
Download

TF name Indegree Outdegree Node connections
CDX2 15 26 41
SMAD3 15 21 36
SOX4 9 26 35
RARG 11 22 33
BACH2 7 14 21
FOSL2 15 19 34
MSX2 12 18 30
FOXQ1 12 15 27
MEF2D 17 13 30
POU2F1 6 24 30

Expression of TFs in all CRCs