Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_007 | Other | Cervical | cervical-cancer_vector | 0.1953642384106 |
Sample_02_021 | Cell line | Colon | V429 | 0.070913808013837 |
Sample_02_069 | Cell line | Brain | SF268 | 0.045801526717557 |
Sample_02_187 | Cell line | Stomach | KATOIII | 0.33333333333333 |
Sample_02_204 | Cell line | Stomach | IM95 | 0.13636363636364 |
Sample_02_242 | Cell line | Colon | V481 | 0.048900852400179 |
Sample_02_355 | Cell line | Colon | HCT15 | 0.06547619047619 |
Sample_02_356 | Cell line | Colon | Sw480 | 0.14193548387097 |
Sample_02_358 | Cell line | Colon | LS180 | 0.18838862559242 |
Sample_02_395 | Cell line | Mammary Gland | BT-549 | 0.11804195804196 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_02_007 | Cervical | Other | cervical-cancer_vector |
Sample_02_242 | Colon | Cell line | V481 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr17 | 46685379 | 46685379 | C | T | exonic | HOXB7 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 46688173 | 46688173 | G | A | exonic | HOXB7 | synonymous | SKCM|1|368|0.00272 |
- | chr17 | 46687954 | 46687954 | G | A | exonic | HOXB7 | synonymous | LIHC|1|373|0.00268 |
rs62637586 | chr17 | 46685348 | 46685348 | G | A | exonic | HOXB7 | synonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr17 | 46687889 | 46687889 | C | T | exonic | HOXB7 | nonsynonymous | ESCA|1|185|0.00541 |
rs745772585 | chr17 | 46685385 | 46685385 | T | C | exonic | HOXB7 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr17 | 46685370 | 46685370 | G | A | exonic | HOXB7 | nonsynonymous | PAAD|1|185|0.00541 |
- | chr17 | 46685168 | 46685168 | T | C | UTR3 | HOXB7 | unknown | SARC|1|247|0.00405 |
- | chr17 | 46685373 | 46685373 | A | C | exonic | HOXB7 | nonsynonymous | SKCM|1|368|0.00272 |
rs748728131 | chr17 | 46688189 | 46688189 | G | A | exonic | HOXB7 | nonsynonymous | LUSC|1|178|0.00562 |
- | chr17 | 46685288 | 46685288 | C | T | exonic | HOXB7 | nonsynonymous | ESCA|1|185|0.00541 |
- | chr17 | 46688210 | 46688210 | C | G | exonic | HOXB7 | nonsynonymous | LUAD|1|543|0.00184 |
rs200174441 | chr17 | 46685449 | 46685449 | G | A | exonic | HOXB7 | nonsynonymous | STAD|2|395|0.00506,STES|2|395|0.00506 |
- | chr17 | 46685443 | 46685443 | G | A | exonic | HOXB7 | stopgain | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 46685395 | 46685395 | C | A | exonic | HOXB7 | stopgain | HNSC|2|512|0.00391 |
- | chr17 | 46685442 | 46685442 | C | T | exonic | HOXB7 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr17 | 46685224 | 46685224 | C | T | exonic | HOXB7 | nonsynonymous | BLCA|1|396|0.00253 |
rs770931876 | chr17 | 46685380 | 46685380 | G | A | exonic | HOXB7 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,LIHC|1|373|0.00268 |
rs761408048 | chr17 | 46685422 | 46685422 | G | A | exonic | HOXB7 | nonsynonymous | LUSC|1|178|0.00562 |
- | chr17 | 46685277 | 46685277 | T | - | exonic | HOXB7 | frameshift | PAAD|1|185|0.00541,THCA|1|504|0.00198 |
- | chr17 | 46685423 | 46685423 | G | T | exonic | HOXB7 | synonymous | LUAD|1|543|0.00184 |
- | chr17 | 46685394 | 46685394 | T | C | exonic | HOXB7 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr17 | 46688035 | 46688035 | C | A | exonic | HOXB7 | synonymous | LIHC|1|373|0.00268 |
- | chr17 | 46685362 | 46685362 | G | A | exonic | HOXB7 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
rs761197780 | chr17 | 46688089 | 46688089 | - | C | exonic | HOXB7 | frameshift | STAD|2|395|0.00506,STES|2|395|0.00506 |
- | chr17 | 46685063 | 46685063 | G | - | UTR3 | HOXB7 | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 46688210 | 46688210 | C | T | exonic | HOXB7 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr17 | 46685369 | 46685369 | C | T | exonic | HOXB7 | synonymous | COADREAD|1|489|0.00204,LUAD|1|543|0.00184,READ|1|122|0.00820 |
rs769072505 | chr17 | 46688090 | 46688090 | C | - | exonic | HOXB7 | frameshift | COAD|1|367|0.00272,COADREAD|1|489|0.00204,ESCA|1|185|0.00541,STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 46685327 | 46685327 | C | A | exonic | HOXB7 | synonymous | LUAD|1|543|0.00184 |
- | chr17 | 46685369 | 46685369 | C | A | exonic | HOXB7 | synonymous | LUSC|1|178|0.00562 |
- | chr17 | 46685276 | 46685276 | C | T | exonic | HOXB7 | synonymous | SKCM|1|368|0.00272 |
- | chr17 | 46685137 | 46685137 | G | A | UTR3 | HOXB7 | unknown | ESCA|1|185|0.00541 |
- | chr17 | 46685097 | 46685097 | - | T | UTR3 | HOXB7 | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
rs777513955 | chr17 | 46688041 | 46688041 | G | C | exonic | HOXB7 | synonymous | HNSC|1|512|0.00195 |
- | chr17 | 46687942 | 46687942 | C | T | exonic | HOXB7 | synonymous | CESC|1|194|0.00515 |
- | chr17 | 46685238 | 46685238 | T | C | exonic | HOXB7 | nonsynonymous | UCEC|1|248|0.00403 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_REGULATION_OF_MORPHOGENESIS_OF_A_BRANCHING_STRUCTURE | BP | HOXB7 |
GO_EMBRYONIC_SKELETAL_SYSTEM_MORPHOGENESIS | BP | HOXB7 |
GO_POSITIVE_REGULATION_OF_KIDNEY_DEVELOPMENT | BP | HOXB7 |
GO_REGULATION_OF_MESONEPHROS_DEVELOPMENT | BP | HOXB7 |
GO_REGULATION_OF_KIDNEY_DEVELOPMENT | BP | HOXB7 |
GO_POSITIVE_REGULATION_OF_MESONEPHROS_DEVELOPMENT | BP | HOXB7 |