Aging Overview

Aging gene

Gene name: SMAD4
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: Fibroblast
Gene ID: 4089
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 33428109
Experiment: qRT-PCR
Description: Next, we assessed expression of cellular senescence and proliferative markers, including p16, p21, and Ki67. The mRNA levels of p16 and p21 were increased > 4-fold and > 5-fold, respectively, in mutant compared to control or SMAD4-WT cells. Consistent with this, expression of the proliferative marker Ki67 was substantially reduced in SMAD4-R496C mutant compared to control cells. Quantitative analysis of the cell cycle regulators, CDK2 and CDC25A, indicated reduced expression in SMAD4-R496C compared to controls, providing further evidence for repressed or halted cell cycle progression and enforcement of cellular senescence.


Regulatory relationship

Regulatory pathway: TGF-β/SMAD-IFNγ
R-AG-Pathway: Activation
Pathway experiment: qRT-PCR//SA-β-gal activity assay
Pathway description: Consistent with this, the growth curve of Werner cells displayed an increased doubling time with passage compared to control normal fibroblasts. At passage 14, the population doubling time of Werner cells was markedly increased compared to corresponding controls, suggesting proliferative arrest and accelerated senescence of Werner cells, as described previously. Increased senescence of Werner cells was further supported by increased numbers of SA-beta positive cells and expression of IL-6, STAT1, and IFNγ.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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