Aging Overview

Aging gene

Gene name: YAP1
Aging type: Prevent
Aging characteristic:
Tissue type: knee
Cell name: SW 1353,Hs 819.T,Chondrocyte
Gene ID: 10413
Category: protein coding
Phenotype: Chondrosarcoma
Experimental category: HL
PMID: 33495462
Experiment: SA-β-gal activity assay//Atomic force microscopy imaging//EdU assay
Description: YAP1 knockdown significantly increased the percentage of senescence-associated β-galactosidase (SA-β-gal)-positive cells in the two different CHS cell strains, including SW 1353 and Hs 819.T. AFM confirmed that knockdown of YAP1 increased the chondrocyte’s elastic modulus, a characteristic of senescent cells, at the single-cell level. In addition, we demonstrated that YAP1 was essential for CHS cell proliferation, as evidenced by that loss of YAP1 reduced the percentage of EdU-incorporated cells, along with the suppression of c-Myc.


Regulatory relationship

Target gene: P21
Official symbol(s): P21
R-AG-Target gene: Downregulation
Subcategory: Unclear
Target gene experiment: Western blot//SA-β-gal activity assay
Target gene description: Notably, loss of YAP1 dramatically upregulated the expression of p21 in the SW 1353 cells, regardless of cell density. As expected, overexpression of HA-YAP1-5SA upregulated the expression of its target gene Cyr61 and, reduced p21 expression and p21-induced cellular senescence in cells expressing shYAP1#4 but not SC.

Regulatory pathway: YAP-P21
R-AG-Pathway: Downregulation
Pathway experiment: Western blot//Immunofluorescence
Pathway description: A lower concentration of VP significantly upregulated p21 expression and increased the percentage of senescent cells, while a higher concentration of VP suppressed the p21 expression, accompanied by pronounced cell apoptosis. Indeed, knockdown of p21 by sip21#3 and sip21#4 remarkably abolished the cell senescence induced by the shYAP1#3 or shYAP1#4. We also found a marked increase in DNA damage upon p21 knockdown, as seen from the representative images of the DNA tails and the calculation of the olive tail moment (OTM). In addition, we also noted that knockdown of p21 increased γ-H2AX expression, accompanied by the activation of caspase-3-dependent apoptosis.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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