Aging Overview

Aging gene

Gene name: BRAF
Aging type: Accelerate
Aging characteristic:
Tissue type: --
Cell name: HPCs,LCH cells
Gene ID: 673
Category: protein coding
Phenotype: Langerhans cell histiocytosis
Experimental category: HL
PMID: 33958797
Experiment: RT-PCR//SA-β-gal activity assay//ELISA//Immunofluorescence//RNA-seq
Description: HPCs isolated from BRAF-V600EScl+ mice were positive for SAβGal; and pro- duced SASP-associated proteins, all features consistent with a senescent state. LCH cells isolated from peripheral tissues of BRAF-V600EScl+ mice were also in a senescent state, as shown by reduced Ki-67 expression, expression of Cdkn2a, SAβGal activity and the production of SASP-associated proteins.Human BRAFV600E-transduced HPCs exhibited canonical markers of cellular senescence, including enlarged cellular size, positivity for SAβGal staining, senescence-associated heterochromatin foci and increased production of SASP cytokines. Gene expression profiling of transduced human BRAF-V600E+GFP+ HPCs confirmed the senescence signature16 and LCH lesions that formed in humanized mice reconstituted with human BRAFV600E CD34+ cells also had increased SAβGal activity and high p16INK4a levels.CD34+ BM cells isolated from patients with LCH also expressed a senescence signature, including increased expression of CDKN2A, CDKN2C, CDKN2D, CD9, MDM2 and genes encoding matrix metalloproteinases.


Regulatory relationship

Regulatory pathway: MTOR
R-AG-Pathway: Activation
Official symbol(s): MTOR
Pathway experiment: ELISA//Flow cytometry
Pathway description: We first confirmed that inhibition of the mTOR pathway was sufficient to reduce the production of inflammatory cytokines by BRAF-V600E+ senescent HPCs in vitro. And in line with our hypothesis, SASP inhibition significantly reduced BRAF-V600E+ HPC skewing into MNPs in vitro. Rapamycin treatment also partially reduced excess MNP differen- tiation from BRAF-V600E GFP HPCs co-cultured with senescent BRAF-V600E+GFP+ HPCs, further establishing that mTOR inhi- bition reduced the release of SASP-associated molecules driving HPC-sustained MNP differentiation potential.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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