Aging Overview

Aging gene

Gene name: IRX5
Aging type: Accelerate
Aging characteristic:
Tissue type: --
Cell name: SW480
Gene ID: 10265
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 32162364
Experiment: SA-β-gal activity assay
Description: Indeed approximately 60% to 70% of IRX5 overexpression cells exhibited positivity for the se- nescence hallmark, SA β gal compared to control ones.


Regulatory relationship

Regulatory pathway: ATM
R-AG-Pathway: Activation
Official symbol(s): ATM
Pathway experiment: Immunofluorescence//RT-PCR//Western blot
Pathway description: As we expected the immunofluorescence staining of ATM increased in IRX5 overexpression cells compared with that in controls. To confirm the inactivation of the ATM pathway by siRNA, real time PCR was performed. According to the efficiency of siRNA, we chose si1 in SW480 and si4 in DLD 1. Meanwhile, the inhibition of ATM significantly reduced the RH2A protein level.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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