Aging Overview

Aging gene

Gene name: HMGB1
Aging type: Prevent
Aging characteristic: Others
Tissue type: Melanoma
Cell name: A375,G361
Gene ID: 3146
Category: protein coding
Phenotype: Melanoma
Experimental category: HL
PMID: 25051367
Experiment: Knockdown//SA-β-gal activity assay//Flow cytometry//Cell proliferation assay
Description: Knockdown of HMGB1 expression resulted in a marked reduction of cell proliferation and importantly, this effect appeared to be nicely correlated with the level of HMGB1 expression.Relative to the control cells, HMGB1- deficient cells showed a significant delay in cell cycle progression.We noticed that the HMGB1 stable knockdown cells appeared to be flatter in shape and larger in size than the matched control cells.This morphology change prompted us to ask whether HMGB1 depletion might induce cellular senescence. Measurement of senescent-associated β-galactosidase activity showed a marked increase of β-Gal-positive cells.


Regulatory relationship

Target gene: P21
Official symbol(s): P21
R-AG-Target gene: --
Subcategory: Unclear
Target gene experiment: Knockdown//SA-β-gal activity assay//Flow cytometry
Target gene description: The result indicates that depletion of p21 expression almost completely abrogated G1 cell cycle arrest induced by HMGB1 deficiency.In addition,knockdown of p21 expression also abolished the senescent phenotype in HMGB1 deficient cells.

Regulatory pathway: SP1
R-AG-Pathway: --
Official symbol(s): SP1
Pathway experiment: Luciferase reporter assay
Pathway description: Consistent with a Sp1-dependent and p53-independent mechanism of p21 regulation, mutation of Sp1 but not p53 binding sites abrogated p21 induction by HMGB1-deficience. Almost identical results were obtained in both A375 and SK-MEL-28 cell lines. These data together confirm a Sp1-depdent mechanism of p21 induction by HMGB1-depletion.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

Loading,please wait...