Aging Overview

Aging gene

Gene name: SOX2
Aging type: Accelerate
Aging characteristic: Others
Tissue type: Tumor tissue
Cell name: HCT116
Gene ID: 6657
Category: protein coding
Phenotype: Colorectal cancer
Experimental category: HL
PMID: 23451179
Experiment: SA-β-gal activity assay//Flow cytometry//Cell proliferation assay//Western blot
Description: Our cell proliferation and cell cycle analyses indicated that Sox2 infection into HCT116 cells suppressed proliferation by inducing accumulation of cells in G0/G1 and sub-G1 and reduction of S cell cycle phases compared with mock-infected cells. The attenuation of cell proliferation was associated with about 90% inhibition of anchorage-independent cancer growth in soft agar, a hallmark of cancer cell properties.We then examined senescence using an SA-?galactosidase assay and found that ectopic expression of Sox2 enhanced ?-galactosidase activity and protein level and suppressed Ki-67 protein level, a cell proliferation marker.


Regulatory relationship

Target gene: ATG10
Official symbol(s): ATG10
R-AG-Target gene: Upregulation
Subcategory: Unclear
Target gene experiment: Knockdown//Luciferase reporter assay//Western blot//RT-PCR//Immunochemical staining
Target gene description: Our cycledependent RT-PCR results demonstrated that the ATG10 mRNA level from Sox2-transfected cells was increased by about 2.5 fold compared with mock.Notably, Western blotting results and immunocytofluorescence against ATG10 indicated that ATG10 and LC3 protein levels were increased by overexpression of Sox2.We found that that deletion of putative Sox2 binding region significantly suppressed luciferase activity. Notably, ATG10 promoter activity was increased by overexpression of Sox2.

Regulatory pathway: --
R-AG-Pathway: --
Pathway experiment: --
Pathway description: --


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



About risk SNP and eQTL

Loading,please wait...