Aging Overview

Aging gene

Gene name: SIN3B
Aging type: Accelerate
Aging characteristic: Others
Tissue type: --
Cell name: MEF
Gene ID: 23309
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 19654306
Experiment: SA-β-gal activity assay//Knockdown
Description: The percentage of Sin3B-/-MEFs that were positive for SA-β-gal staining was significantly lower than that of their wild-type counterparts at passage 6. This observation corroborates the noticeable differences in cell morphology after six to eight passages between Sin3B-/-and Sin3B+/+ MEFs, which appeared significantly more flat and enlarged, irrespective of the cell density.


Regulatory relationship

Target gene: E2F
Official symbol(s): E2F1
R-AG-Target gene: --
Subcategory: Unclear
Target gene experiment: CHIP
Target gene description: To showthe direct role of Sin3B in mediating E2F transcriptional control, we performed chromatin immunoprecipitation experiments. We found that Sin3B is strongly and specifically enriched at E2F target promoters upon RasV12 overexpression , but not at nonrelevant promoters such as oct4 , we showed that this enrichment for heterochromatin marks at E2F target promoters upon oncogenic stress requires the presence of Sin3B.

Regulatory pathway: P19-P53
R-AG-Pathway: --
Official symbol(s): IL23A-TP53
Pathway experiment: Western blot//Knockdown
Pathway description: As previously reported, expression of p19ARF was induced upon transduction of activated Ras into wild-type cells . Surprisingly, in Sin3B / cells overexpressing activated Ras, the level of p19ARF protein was comparable with that detected in Sin3B+/+ cells. However, the amount of p19ARF detected in the absence of oncogenic stress was significantly higher in Sin3B -/-cells compared with Sin3B+/+ cells .Our observation that Sin3B-/- fibroblasts do not senesce upon RasV12 expression, in spite of high levels of p19ARF, strongly suggests that Sin3B functions downstream of p19ARF in oncogene-induced senescence. These results showthat, although Sin3B participates in the transcriptional repression of p19ARF under normal culture conditions, it is required for the induction of senescence upon activation of the p19ARF/p53 pathway.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Related pathway view

About risk SNP and eQTL

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