Aging Overview

Aging gene

Gene name: PPM1D
Aging type: Prevent
Aging characteristic: Others
Tissue type: --
Cell name: mesenchymal-stem-cell
Gene ID: 8493
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 19544416
Experiment: XTT assay//Growth curve assay
Description: Early-passage hMSCs (p5, open circle) and late-passage Wip1-hMSC (p12, filled square) proliferated normally, whereas late-passage Cont-hMSCs (p12, open square) underwent distinct cell growth arrest(To define ‘‘early-passage’’ and ‘‘late-passage’’ cells, we referred to the previous report that elucidated the growth kinetics of hMSCs [6]. According to those results, the growth of hMSCs is significantly retarded after passage number 10; thus, we used the term late passage for hMSCs grown more than 10 passages. This difference in cell growth rate was reproduced using the XTT assay: late-passage hMSCs (p13) barely proliferated after 1 week, whereas Wip1-hMSCs at the same passage level proliferated in a fashion similar to early-passage hMSCs.We therefore concluded that Wip1-hMSCs bypassed the cell growth arrest that occurs in late-passage hMSCs.


Regulatory relationship

Target gene: P16//P38
Official symbol(s): P16//P38
R-AG-Target gene: Downregulation//Downregulation
Subcategory: Unclear
Target gene experiment: qRT-PCR//Western blot
Target gene description: Consistently, p16 mRNA levels determined by semiquantitative real-time PCR were upregulated in late-passage hMSCs, compared with early-passage hMSCs that had not experienced growth arrest. Interestingly, p16 mRNA levels in later passage Wip1-hMSCs were significantly lower than in the late-passage hMSCs.As expected, p38 activity determined by p38 in vitro kinase assay using ATF-2 as a substrate was increased by 50%, whereas p38 activity in Wip1-expressing hMSCs was decreased by 50%.

Regulatory pathway: --
R-AG-Pathway: --
Pathway experiment: --
Pathway description: --


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



About risk SNP and eQTL

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