Aging Overview

Aging gene

Gene name: IFNG
Aging type: Accelerate
Aging characteristic:
Tissue type: --
Cell name: Melanocyte
Gene ID: 3458
Category: protein coding
Phenotype: Vitiligo
Experimental category: L
PMID: 24681574
Experiment: Flow cytometry//SA-β-gal activity assay
Description: IFN-γ significantly decreased the cell viability in a dose dependent manner. Cell cycle analysis results demonstrated that IFN-c at both concentrations caused the accumulation of melanocytes at G1 phase, while decreased the percentage of cells at S and G2/M phases.In contrast, melanocytes after persistent IFN-γ treatment became large, flat in shape with shorter and fewer dendrites, and some cells were highly pigmented.We also noticed a significantincrease of SA-β-gal stain ing, a marker of senescence, in melanocytes with 7 days of IFN-γ stimulation.


Regulatory relationship

Target gene: P21/WAF1
Official symbol(s): P21/WAF1
R-AG-Target gene: Upregulation
Subcategory: Unclear
Target gene experiment: Western blot//SA-β-gal activity assay
Target gene description: Immunoblotting analysis indicated that protein level of p21 was greatly elevated with the increasing duration of IFN-γ treatment,while p16 level didn’t change during the experiment.P21 siRNA treatment suppressed the IFN-γ-induced increase of SA-β-gal staining.

Regulatory pathway: JAK2-STAT1
R-AG-Pathway: --
Official symbol(s): JAK2-STAT1
Pathway experiment: MTS assay//Western blot//SA-β-gal activity assay//Flow cytometry
Pathway description: In the presence of IFN-γ, the cell viability of control siRNA transfected melanocytes was significantly inhibited. Significantly, JAK2 or STAT1 siRNA efficiently restored the viability of melanocytes. Immunoblotting results confirmed that JAK2 or STAT1 siRNA, but not JAK1 siRNA inhibited the increase of p21 induced by IFN-. Moreover, IFN-γ-induced SA-β-gal staining increase in melanocytes was blocked by JAK2 and STAT1 siRNAs.IFN-γ treatment caused obvious elevation of intracellular ROS, and the effect of IFN-γ was dose-dependent manner.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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