Aging Overview

Aging gene

Gene name: SIRT2
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: NP
Gene ID: 22933
Category: protein coding
Phenotype: Disc degenerative disease
Experimental category: L
PMID: 30981502
Experiment: SA-β-gal activity assay//Western blot//Knockdown//RT-PCR//Flow cytometry
Description: NP cells expressed significantly higher β-gal and MMP3/9 levels with higher IL-1b stimulation. NP cells were transfected with Lenti-sirt2 to overexpress Sirt2 protein. Meanwhile, Lenti-NC was used as the sham group. The function of lentivirus transfection was verified through WB analysis. Results indicated that these cells exhibited significantly less β-gal, MMP3/9 activity than those in IL-1b-induced group. Furthermore, IF staining, WB and RT-PCR analysis demonstrated that the expression of type II collagen was significantly up-regulated.Flow cytometry result showed that compared with the control group, more cells stayed in the G1 phase and less cells stayed in the M phase in the two IL-1b stimulation groups. Total ROS level increased remarkably under the treatment of IL-1b.


Regulatory relationship

Target gene: IL-1β//SOD1//SOD2
Official symbol(s): IL1B//SOD1//SOD2
R-AG-Target gene: Downregulation//Upregulation//Upregulation
Subcategory: Unclear
Target gene experiment: RT-PCR//Western blot//Flow cytometry
Target gene description: Results indicated that these cells exhibited significantly less β-gal, MMP3/9 activity than those in IL-1b-induced group.Sirt2 expression decreased significantly in cells after treatment with IL-1b. Meanwhile, total ROS level decreased obviously under the treatment of Lenti-sirt2.In addition, anti-oxidative SOD1 and SOD2 were remarkably up-regulated compared with IL-1b- induced group.

Regulatory pathway: P53-P21
R-AG-Pathway: Downregulation
Official symbol(s): TP53-CDKN1A
Pathway experiment: Western blot//RT-PCR
Pathway description: Western blot and RT-PCR results indicated that Sirt6 overexpression significantly decreased the expressions of p53 and p21.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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