Aging Overview

Aging gene

Gene name: PRDX6
Aging type: Prevent
Aging characteristic:
Tissue type: Gastrocnemius
Cell name: C2C12
Gene ID: 9588
Category: protein coding
Phenotype: Metabolic Sarcopenia
Experimental category: HL
PMID: 32316601
Experiment: SA-β-gal activity assay//Knockdown//qRT-PCR
Description: We screened the expression of 84 key genes involved in the senescence program on gastrocnemius of wt and Prdx6-/- mice. A significant up-regulation of p53 (p < 0.05),Cdkn1b (p < 0.05) and Cdkn1c (p < 0.05), was found in Prdx6-/- mice.Prdx6-/- mice showed increase in activity of SA-β-Gal compared to wt mice (p < 0.005).The expression levels of telomeric repeat-binding factor 1 (TERF1), telomeric repeat-binding factor 2-interacting protein 1 (TERF2IP), telomerase-associated protein 1 (TEP1), and regulator of telomere length 1 (RTEL1), were significantly reduced in Prdx6-/-mice compared to wt mice (p < 0.05).


Regulatory relationship

Target gene: SIRT1
Official symbol(s): SIRT1
R-AG-Target gene: --
Subcategory: Unclear
Target gene experiment: Western blot//Knockdown
Target gene description: Following the nuclear and cytoplasmic proteins fractionation, indeed, we found that in Prdx6-/- mice SIRT1 localized predominantly in the cytoplasm (p < 0.05) rather than in the nucleus (p < 0.0005) compared to wt, suggesting reduced levels of Prdx6 lead to an impairment of SIRT1 nuclearcytoplasmic shuttling.

Regulatory pathway: P53-P21
R-AG-Pathway: --
Official symbol(s): TP53-CDKN1A
Pathway experiment: Western blot//Knockdown
Pathway description: As expected, p53 acetylation was significantly increased in Prdx6-/- mice compared to wt mice, confirming the SIRT1 reduced nuclear activity. Acetylated p53 induces p21, a cyclin-dependent kinase inhibitor 1 able to regulate cell cycle and directly blunt telomerase activity . Consistently with the reduction of ATLR and increase in p53 activation, we observed a significantly enhanced steady-state levels of p21 in Prdx6-/- mice.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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