Aging Overview

Aging gene

Gene name: IFNG
Aging type: Accelerate
Aging characteristic:
Tissue type: --
Cell name: HeLa
Gene ID: 3458
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 25982278
Experiment: Western blot//Immunofluorescence//BrdU assay//SA-β-gal activity assay
Description: The number of DDR foci gradually increased during the treatment, accompanied by activation of the DDR kinase Chk2 (phosphorylated on threonine 68) and serine15-phosphorylation of p53, an established target of DDR kinases such as ATM. Cell proliferation was impaired, as judged from diminished numbers of BrdU-incorporating cells, with concomitant development of premature senescence-like phenotype including cell spreading, nuclear enlargement, SA-β-gal and elevated cdk inhibitors p15INK4B (p15) and p21Cip1. Enhanced cyclin A, decreased PLK-1 and cyclin B at day 14 indicated a predominant G2-phase delay/arrest. Senescence-associated promyelocytic leukemia (PML) nuclear bodies were also increased, consistent with the recognized role of IFNs in stimulation of PML expression .


Regulatory relationship

Target gene: NOX4//ANT2
Official symbol(s): NOX4//SLC25A5
R-AG-Target gene: --//Downregulation
Subcategory: Unclear
Target gene experiment: Western blot//Flow cytometry
Target gene description: Indeed, a 24 h treatment of HeLa cells with IFNγ (100 U/ml) transiently activated STAT1 (not shown)and induced TGFβ secretion, SMAD2 phosphorylation, Nox1 and Nox4 expression and induction, ROS production, and the DDR and inhibited cell proliferation, all detected at day 6 after a single dose of IFNγ. This multifaceted esponse indicated that even a short-term exposure of cells to IFNγ is sufficient to trigger a cascade of events leading to cellular senescence. Downregulation of ANT2 in IFNγ-treated cells led to increased proportion of apoptotic cells compared with IFNγ treatment alone, indicating the contribution of ANT2 suppression to increased genotoxic stress.

Regulatory pathway: TGFβ-SMAD
R-AG-Pathway: Activation
Official symbol(s): TGFB1-SMAD
Pathway experiment: Western blot
Pathway description: TGFβ signaling pathways detected as phosphorylated SMAD2/SMAD3 were activated by IFNγ.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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