Aging Overview

Aging gene

Gene name: ZEB1
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: SW480
Gene ID: 6935
Category: protein coding
Phenotype: Colorectal cancer
Experimental category: HL
PMID: 27965283
Experiment: SA-β-gal activity assay//Knockdown
Description: We found that ZEB1 knockdown increased the number of SA β-gal-positive cells and that Wnt3a inhibited basal SA β-gal activity in SW480-shCtl cells but not in SW480-shZEB1-A cells.


Regulatory relationship

Target gene: DDK1//MUTANT P53//MDM2//CTBP//MACROH2A1
Official symbol(s): MGME1//MUTANT P53//MDM2//CTBP//MACROH2A1
R-AG-Target gene: Activation//Activation//Activation//Activation//Downregulation
Subcategory: Unclear
Target gene experiment: Knockdown//Western blot//CHIP//qRT-PCR
Target gene description: Accordingly, the transcriptional activity of serial deletions of the DKK1 promoter increased when the site at?490 bp was included.The ability of endogenous ZEB1 to directly bind to the DKK1 promoter was tested for the site at ?490 bp by ChIP assay.Furthermore, mutation of the CtBP binding sites in ZEB1 (ZEB1-CIDmut) hampered ZEB1’s repression of H2AFY,We found that blocking of CtBP activity in SW480 cells by MTOB induced senescence and upregulated H2AFY.We found that overexpression of DKK1 or addition of rhDKK1, but not rhDKK3, in mutant SW480 cells upregulated mutant TP53 and MDM2 expression in these cells . In turn, DKK1 knockdown downregulated both mutant TP53 and MDM2 and this downregulation was reverted by addition of rhDKK1, but not of rhDKK3. The downstream effect of DKK1 via mutant p53 was corroborated by the knockdown of the latter with a specific siRNA (siTP53). siTP53, but not siCtl, downregulated mRNA expression levels of MDM2 and CTBP while increasing those of H2AFY .

Regulatory pathway: --
R-AG-Pathway: --
Pathway experiment: --
Pathway description: --


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



About risk SNP and eQTL

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