Aging Overview

Aging gene

Gene name: TBX2
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: MCF-7
Gene ID: 6909
Category: protein coding
Phenotype: Breast cancer
Experimental category: HL
PMID: 20348948
Experiment: Clonogenic assay//Knockdown//SA-β-gal activity assay
Description: We performed TBX2 siRNA knockdown in three breast cancer cell lines and after confirming knockdown we assessed effects on cell growth using clonogenic assays. We observed dramatic growth inhibition in all three cell lines.Finally, using senescence-associated β-galactosidase staining we could also show that knockdown of either TBX2 or EGR1 by transfection of NDRG1 into MCF7 cells that resulted in increased expression of Dec1, indicating that NDRG1 may contribute to the cell senescence observed after TBX2 inhibition.


Regulatory relationship

Target gene: NDRG1
Official symbol(s): NDRG1
R-AG-Target gene: Downregulation
Subcategory: Binding to promoter
Target gene experiment: Western blot//RT-PCR//Knockdown
Target gene description: The most consistently TBX2-regulated gene was NDRG1, which showed consistent upregulation after TBX2 siRNA in several breast cancer cell lines. We also observed NDRG1 upregulation both at the mRNA and protein level after induction of DN-TBX2 in MCF7 cells . Together, these data show that TBX2 represses multiple target genes with NDRG1 consistently upregulated after TBX2 inhibition.

Regulatory pathway: --
R-AG-Pathway: --
Pathway experiment: --
Pathway description: --


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



About risk SNP and eQTL

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