Aging Overview

Aging gene

Gene name: BTG3
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: HCT116
Gene ID: 492479
Category: protein coding
Phenotype: Aging
Experimental category: HL
PMID: 22020331
Experiment: SA-β-gal activity assay//Flow cytometry//BrdU assay//Western blot//Cell morphological analysis//Knockdown
Description: In contrast to what was observed previously in HCT116 cells,loss of BTG3 expression in IMR90 cells resulted in blunted cell proliferation, as demonstrated by a significant decrease of cells in the S phase, a moderate increase in the G1 population, a marked reduction in BrdU incorporation and RB phosphorylation. The slowed proliferation remained for at least for 2 weeks , indicating that this is not a transient growth arrest. Additionally, BTG3-knockdown cells displayed the enlarged, flattened morphology that is typical of senescent cells . The phenotype was confirmed by staining the cells for senescenceassociated β-galactosidase (SA-β-Gal) activity: we observed an increase in SA-β-Gal staining of at least sixfold 48 h after transfection with the BTG3-2 siRNA , which was further enhanced 1 week after transfection.


Regulatory relationship

Target gene: JMJD3
Official symbol(s): KDM6B
R-AG-Target gene: --
Subcategory: Unclear
Target gene experiment: RT-PCR//Knockdown
Target gene description: Using RT PCR, we found that the expression of JMJD3 was increased in BTG3-knockdown cells.

Regulatory pathway: ERK-AP1
R-AG-Pathway: --
Official symbol(s): MAPK1-JUN
Pathway experiment: RT-PCR//SA-β-gal activity assay//Knockdown
Pathway description: To confirm the involvement of the ERK signaling pathway, we treated BTG3-knockdown IMR90 cells with the ERK-specific inhibitor PD98059. As a result, a significant reduction in senescence was observed when ERK was inhibited. In contrast, two other unrelated drugs, SB202190 (p38 inhibitor) and SB202474 (negative control), had no apparent effect, indicating the specificity of the treatment.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Related pathway view

About risk SNP and eQTL

Loading,please wait...