Aging Overview

Aging gene

Gene name: TGFB1
Aging type: Accelerate
Aging characteristic:
Tissue type: --
Cell name: HCEC
Gene ID: 7040
Category: protein coding
Phenotype: Aging
Experimental category: L
PMID: 27713146
Experiment: SA-β-gal activity assay//Flow cytometry//qPCR//Western blot
Description: Cell cycle analysis by flow cytometer showed that the HCECs accumulated at G1 phase with a concomitant depletion of S phase cells after TGF-β1 exposure, suggesting that cell cycle arrest during HCECs senescence induced by TGF-β1 occurred at G1 phase, while H2O2 induced an obvious G2/M phase arrest. In association with the G1 arrest, we also found TGF-β1 increased the percentage of SA-β-gal staining cells and concomitantly increased the expression of p16 and p21, as analyzed by real-time PCR or western blot. In order to further confirm the effect of TGF-β on cellular senescence, we interrupted the TGF-β signaling pathway using a specific inhibitor, LY364947. When treated with LY364947, the percentage of SA-β-gal staining cells was significantly decreased, and the levels of p21 and p16 were also downregulated.


Regulatory relationship

Regulatory pathway: NF-κB
R-AG-Pathway: Activation
Official symbol(s): NFKB1
Pathway experiment: Western blot
Pathway description: Compared with pre-senescent cells, TGF-β1 treatment led to significant reduction in IκBα protein levels. IκBα is a canonical and specific inhibitor of NF-κB, and its reduction suggested elevated NF-κB activity in TGFβ-induced senescent cells; our subsequent results confirmed this. IκBα loss is the key step that immediately releases cytoplasmic NF-κB for nuclear translocation and the subsequent phosphorylation of p65, a subunit of NF-κB. Therefore, we measured the phosphorylation of p65 in HCECs treated with or without TGF-β. Much more phosphorylation of p65was found in TGF-β-treated HCECs than in untreated cells.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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